Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.62■□□□□ 0.57
ACKR3P25106 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ACKR3P25106 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.62■□□□□ 0.57
ACKR3P25106 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
ACKR3P25106 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ACKR3P25106 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ACKR3P25106 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ACKR3P25106 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
ACKR3P25106 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ACKR3P25106 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ACKR3P25106 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ACKR3P25106 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ACKR3P25106 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ACKR3P25106 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
ACKR3P25106 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.61■□□□□ 0.57
ACKR3P25106 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ACKR3P25106 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ACKR3P25106 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ACKR3P25106 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ACKR3P25106 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.61■□□□□ 0.57
ACKR3P25106 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ACKR3P25106 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ACKR3P25106 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ACKR3P25106 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ACKR3P25106 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ACKR3P25106 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ACKR3P25106 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ACKR3P25106 AC010141.3-201ENST00000456659 717 ntBASIC18.61■□□□□ 0.57
ACKR3P25106 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ACKR3P25106 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.61■□□□□ 0.57
ACKR3P25106 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ACKR3P25106 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ACKR3P25106 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
ACKR3P25106 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.6■□□□□ 0.57
ACKR3P25106 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
ACKR3P25106 OR7E47P-201ENST00000546390 1422 ntBASIC18.6■□□□□ 0.57
ACKR3P25106 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ACKR3P25106 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ACKR3P25106 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.6■□□□□ 0.57
ACKR3P25106 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ACKR3P25106 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.6■□□□□ 0.57
ACKR3P25106 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.6■□□□□ 0.57
ACKR3P25106 AC087239.1-201ENST00000622671 572 ntBASIC18.6■□□□□ 0.57
ACKR3P25106 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ACKR3P25106 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ACKR3P25106 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
ACKR3P25106 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ACKR3P25106 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.6■□□□□ 0.57
ACKR3P25106 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ACKR3P25106 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
ACKR3P25106 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.6■□□□□ 0.57
ACKR3P25106 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.6■□□□□ 0.57
ACKR3P25106 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.6■□□□□ 0.57
ACKR3P25106 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.6■□□□□ 0.57
ACKR3P25106 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.59■□□□□ 0.57
ACKR3P25106 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.59■□□□□ 0.57
ACKR3P25106 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ACKR3P25106 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ACKR3P25106 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
ACKR3P25106 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.59■□□□□ 0.57
ACKR3P25106 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.59■□□□□ 0.57
ACKR3P25106 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ACKR3P25106 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ACKR3P25106 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
ACKR3P25106 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ACKR3P25106 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.58■□□□□ 0.57
ACKR3P25106 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ACKR3P25106 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
ACKR3P25106 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ACKR3P25106 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
ACKR3P25106 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ACKR3P25106 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.58■□□□□ 0.56
ACKR3P25106 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ACKR3P25106 UNC93B3-201ENST00000308076 687 ntBASIC18.58■□□□□ 0.56
ACKR3P25106 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
ACKR3P25106 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
ACKR3P25106 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.58■□□□□ 0.56
ACKR3P25106 AC026471.6-201ENST00000622954 1905 ntBASIC18.58■□□□□ 0.56
ACKR3P25106 OXCT2P1-201ENST00000447263 1535 ntBASIC18.58■□□□□ 0.56
ACKR3P25106 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
ACKR3P25106 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ACKR3P25106 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ACKR3P25106 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
ACKR3P25106 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ACKR3P25106 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ACKR3P25106 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ACKR3P25106 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ACKR3P25106 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.57■□□□□ 0.56
ACKR3P25106 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.57■□□□□ 0.56
ACKR3P25106 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ACKR3P25106 MIR4767-201ENST00000582827 78 ntBASIC18.57■□□□□ 0.56
ACKR3P25106 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
ACKR3P25106 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ACKR3P25106 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
ACKR3P25106 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ACKR3P25106 AL121603.2-201ENST00000557373 2117 ntBASIC18.56■□□□□ 0.56
ACKR3P25106 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ACKR3P25106 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
ACKR3P25106 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
ACKR3P25106 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms