Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCND1P24385 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCND1P24385 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
CCND1P24385 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCND1P24385 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCND1P24385 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCND1P24385 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCND1P24385 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
CCND1P24385 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCND1P24385 AC080038.3-201ENST00000623346 1952 ntBASIC21.49■■□□□ 1.03
CCND1P24385 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCND1P24385 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.49■■□□□ 1.03
CCND1P24385 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.49■■□□□ 1.03
CCND1P24385 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCND1P24385 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCND1P24385 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.49■■□□□ 1.03
CCND1P24385 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.49■■□□□ 1.03
CCND1P24385 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.49■■□□□ 1.03
CCND1P24385 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCND1P24385 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCND1P24385 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCND1P24385 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCND1P24385 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCND1P24385 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCND1P24385 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCND1P24385 DUX4L19-201ENST00000557448 1267 ntBASIC21.48■■□□□ 1.03
CCND1P24385 AC099791.2-201ENST00000605725 427 ntBASIC21.48■■□□□ 1.03
CCND1P24385 MIR4466-201ENST00000606121 54 ntBASIC21.48■■□□□ 1.03
CCND1P24385 AL499627.2-201ENST00000606283 725 ntBASIC21.48■■□□□ 1.03
CCND1P24385 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCND1P24385 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCND1P24385 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCND1P24385 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCND1P24385 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
CCND1P24385 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCND1P24385 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCND1P24385 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCND1P24385 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCND1P24385 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
CCND1P24385 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCND1P24385 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCND1P24385 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.47■■□□□ 1.03
CCND1P24385 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.47■■□□□ 1.03
CCND1P24385 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.46■■□□□ 1.03
CCND1P24385 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
CCND1P24385 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCND1P24385 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCND1P24385 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCND1P24385 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
CCND1P24385 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCND1P24385 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.46■■□□□ 1.03
CCND1P24385 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.46■■□□□ 1.03
CCND1P24385 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.46■■□□□ 1.03
CCND1P24385 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCND1P24385 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.46■■□□□ 1.03
CCND1P24385 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.46■■□□□ 1.03
CCND1P24385 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCND1P24385 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CCND1P24385 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCND1P24385 AL391422.3-201ENST00000603791 2761 ntBASIC21.46■■□□□ 1.03
CCND1P24385 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCND1P24385 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
CCND1P24385 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.45■■□□□ 1.02
CCND1P24385 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCND1P24385 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCND1P24385 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCND1P24385 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.45■■□□□ 1.02
CCND1P24385 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.45■■□□□ 1.02
CCND1P24385 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCND1P24385 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.45■■□□□ 1.02
CCND1P24385 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCND1P24385 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCND1P24385 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.45■■□□□ 1.02
CCND1P24385 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCND1P24385 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CCND1P24385 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
CCND1P24385 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCND1P24385 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.44■■□□□ 1.02
CCND1P24385 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.44■■□□□ 1.02
CCND1P24385 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCND1P24385 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.44■■□□□ 1.02
CCND1P24385 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCND1P24385 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCND1P24385 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCND1P24385 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCND1P24385 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCND1P24385 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCND1P24385 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.44■■□□□ 1.02
CCND1P24385 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCND1P24385 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CCND1P24385 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.44■■□□□ 1.02
CCND1P24385 AL157384.1-201ENST00000445995 2473 ntBASIC21.44■■□□□ 1.02
CCND1P24385 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.44■■□□□ 1.02
CCND1P24385 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCND1P24385 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCND1P24385 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.43■■□□□ 1.02
CCND1P24385 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.43■■□□□ 1.02
CCND1P24385 AL136116.3-201ENST00000402907 1138 ntBASIC21.43■■□□□ 1.02
CCND1P24385 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.43■■□□□ 1.02
CCND1P24385 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms