Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.79■□□□□ 0.76
NR4A1P22736 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.79■□□□□ 0.76
NR4A1P22736 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.79■□□□□ 0.76
NR4A1P22736 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NR4A1P22736 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NR4A1P22736 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NR4A1P22736 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
NR4A1P22736 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
NR4A1P22736 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NR4A1P22736 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.79■□□□□ 0.76
NR4A1P22736 AC007952.6-201ENST00000573168 2673 ntBASIC19.79■□□□□ 0.76
NR4A1P22736 AC003957.1-201ENST00000625108 2673 ntBASIC19.79■□□□□ 0.76
NR4A1P22736 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
NR4A1P22736 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.78■□□□□ 0.76
NR4A1P22736 AL353803.4-201ENST00000565882 1934 ntBASIC19.78■□□□□ 0.76
NR4A1P22736 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NR4A1P22736 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.78■□□□□ 0.76
NR4A1P22736 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
NR4A1P22736 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NR4A1P22736 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NR4A1P22736 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NR4A1P22736 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NR4A1P22736 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NR4A1P22736 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.78■□□□□ 0.76
NR4A1P22736 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NR4A1P22736 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NR4A1P22736 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
NR4A1P22736 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NR4A1P22736 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.78■□□□□ 0.76
NR4A1P22736 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NR4A1P22736 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NR4A1P22736 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.77■□□□□ 0.76
NR4A1P22736 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NR4A1P22736 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NR4A1P22736 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NR4A1P22736 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NR4A1P22736 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NR4A1P22736 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
NR4A1P22736 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.77■□□□□ 0.76
NR4A1P22736 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.77■□□□□ 0.76
NR4A1P22736 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.77■□□□□ 0.76
NR4A1P22736 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.77■□□□□ 0.76
NR4A1P22736 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
NR4A1P22736 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NR4A1P22736 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NR4A1P22736 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
NR4A1P22736 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
NR4A1P22736 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
NR4A1P22736 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.76■□□□□ 0.75
NR4A1P22736 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NR4A1P22736 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NR4A1P22736 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
NR4A1P22736 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NR4A1P22736 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NR4A1P22736 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NR4A1P22736 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
NR4A1P22736 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
NR4A1P22736 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
NR4A1P22736 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NR4A1P22736 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NR4A1P22736 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NR4A1P22736 LINC01521-201ENST00000504184 1943 ntBASIC19.76■□□□□ 0.75
NR4A1P22736 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.76■□□□□ 0.75
NR4A1P22736 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NR4A1P22736 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
NR4A1P22736 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
NR4A1P22736 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NR4A1P22736 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.75■□□□□ 0.75
NR4A1P22736 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NR4A1P22736 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
NR4A1P22736 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NR4A1P22736 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
NR4A1P22736 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.75■□□□□ 0.75
NR4A1P22736 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.75■□□□□ 0.75
NR4A1P22736 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NR4A1P22736 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NR4A1P22736 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
NR4A1P22736 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NR4A1P22736 AL356740.2-201ENST00000601559 647 ntBASIC19.75■□□□□ 0.75
NR4A1P22736 AL117332.1-201ENST00000622628 974 ntBASIC19.75■□□□□ 0.75
NR4A1P22736 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NR4A1P22736 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NR4A1P22736 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NR4A1P22736 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NR4A1P22736 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NR4A1P22736 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NR4A1P22736 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
NR4A1P22736 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NR4A1P22736 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
NR4A1P22736 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.74■□□□□ 0.75
NR4A1P22736 MIR3621-201ENST00000580529 85 ntBASIC19.74■□□□□ 0.75
NR4A1P22736 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.74■□□□□ 0.75
NR4A1P22736 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.74■□□□□ 0.75
NR4A1P22736 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.74■□□□□ 0.75
NR4A1P22736 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.74■□□□□ 0.75
NR4A1P22736 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
NR4A1P22736 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NR4A1P22736 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
NR4A1P22736 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NR4A1P22736 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms