Protein–RNA interactions for Protein: P20929

NEB, Nebulin, humanhuman

Predictions only

Length 6,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEBP20929 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC8.35□□□□□ -1.07
NEBP20929 BX255925.1-201ENST00000566954 1854 ntBASIC8.35□□□□□ -1.07
NEBP20929 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
NEBP20929 SLC25A3P1-201ENST00000443844 931 ntBASIC8.35□□□□□ -1.07
NEBP20929 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC8.35□□□□□ -1.07
NEBP20929 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC8.35□□□□□ -1.07
NEBP20929 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
NEBP20929 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
NEBP20929 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
NEBP20929 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
NEBP20929 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
NEBP20929 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC8.35□□□□□ -1.07
NEBP20929 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC8.35□□□□□ -1.07
NEBP20929 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
NEBP20929 GXYLT1P4-201ENST00000613576 1192 ntBASIC8.35□□□□□ -1.07
NEBP20929 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
NEBP20929 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
NEBP20929 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
NEBP20929 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
NEBP20929 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC8.35□□□□□ -1.07
NEBP20929 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC8.35□□□□□ -1.07
NEBP20929 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
NEBP20929 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
NEBP20929 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC8.35□□□□□ -1.07
NEBP20929 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
NEBP20929 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
NEBP20929 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
NEBP20929 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC8.34□□□□□ -1.07
NEBP20929 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC8.34□□□□□ -1.07
NEBP20929 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC8.34□□□□□ -1.07
NEBP20929 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
NEBP20929 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
NEBP20929 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
NEBP20929 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
NEBP20929 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC8.34□□□□□ -1.07
NEBP20929 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC8.34□□□□□ -1.07
NEBP20929 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
NEBP20929 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
NEBP20929 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC8.34□□□□□ -1.07
NEBP20929 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
NEBP20929 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC8.34□□□□□ -1.07
NEBP20929 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC8.34□□□□□ -1.07
NEBP20929 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC8.34□□□□□ -1.07
NEBP20929 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC8.34□□□□□ -1.07
NEBP20929 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC8.34□□□□□ -1.07
NEBP20929 AL845331.1-201ENST00000424978 1190 ntBASIC8.34□□□□□ -1.07
NEBP20929 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC8.34□□□□□ -1.07
NEBP20929 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
NEBP20929 AP001160.3-201ENST00000601484 763 ntBASIC8.34□□□□□ -1.08
NEBP20929 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC8.34□□□□□ -1.08
NEBP20929 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
NEBP20929 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC8.33□□□□□ -1.08
NEBP20929 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC8.33□□□□□ -1.08
NEBP20929 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
NEBP20929 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC8.33□□□□□ -1.08
NEBP20929 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC8.33□□□□□ -1.08
NEBP20929 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC8.33□□□□□ -1.08
NEBP20929 NDUFV2-AS1-203ENST00000608008 779 ntBASIC8.33□□□□□ -1.08
NEBP20929 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
NEBP20929 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NEBP20929 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NEBP20929 COPS8-203ENST00000409334 794 ntTSL 5 BASIC8.33□□□□□ -1.08
NEBP20929 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC8.33□□□□□ -1.08
NEBP20929 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NEBP20929 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC8.33□□□□□ -1.08
NEBP20929 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC8.33□□□□□ -1.08
NEBP20929 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
NEBP20929 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC8.33□□□□□ -1.08
NEBP20929 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC8.33□□□□□ -1.08
NEBP20929 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC8.33□□□□□ -1.08
NEBP20929 HCG4P8-203ENST00000443049 980 ntBASIC8.33□□□□□ -1.08
NEBP20929 TK2-204ENST00000525974 1178 ntTSL 2 BASIC8.33□□□□□ -1.08
NEBP20929 AC026471.5-201ENST00000615068 467 ntBASIC8.33□□□□□ -1.08
NEBP20929 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC8.33□□□□□ -1.08
NEBP20929 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
NEBP20929 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC8.33□□□□□ -1.08
NEBP20929 AC007322.4-201ENST00000509611 723 ntBASIC8.33□□□□□ -1.08
NEBP20929 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC8.33□□□□□ -1.08
NEBP20929 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC8.33□□□□□ -1.08
NEBP20929 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC8.33□□□□□ -1.08
NEBP20929 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NEBP20929 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
NEBP20929 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
NEBP20929 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
NEBP20929 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
NEBP20929 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
NEBP20929 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
NEBP20929 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC8.32□□□□□ -1.08
NEBP20929 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC8.32□□□□□ -1.08
NEBP20929 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC8.32□□□□□ -1.08
NEBP20929 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC8.32□□□□□ -1.08
NEBP20929 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
NEBP20929 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
NEBP20929 AC022616.7-201ENST00000525383 220 ntBASIC8.32□□□□□ -1.08
NEBP20929 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
NEBP20929 KRT18P13-201ENST00000400056 1290 ntBASIC8.32□□□□□ -1.08
NEBP20929 AL022342.1-201ENST00000400363 863 ntBASIC8.32□□□□□ -1.08
NEBP20929 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
NEBP20929 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC8.32□□□□□ -1.08
NEBP20929 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC8.32□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms