Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
XRCC1P18887 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
XRCC1P18887 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
XRCC1P18887 AL354811.1-201ENST00000610286 706 ntBASIC21.37■■□□□ 1.01
XRCC1P18887 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
XRCC1P18887 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
XRCC1P18887 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
XRCC1P18887 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
XRCC1P18887 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
XRCC1P18887 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
XRCC1P18887 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
XRCC1P18887 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
XRCC1P18887 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
XRCC1P18887 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
XRCC1P18887 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.36■■□□□ 1.01
XRCC1P18887 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
XRCC1P18887 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.36■■□□□ 1.01
XRCC1P18887 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
XRCC1P18887 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.36■■□□□ 1.01
XRCC1P18887 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.36■■□□□ 1.01
XRCC1P18887 AC012414.1-201ENST00000556676 535 ntBASIC21.36■■□□□ 1.01
XRCC1P18887 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.36■■□□□ 1.01
XRCC1P18887 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
XRCC1P18887 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
XRCC1P18887 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
XRCC1P18887 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.36■■□□□ 1.01
XRCC1P18887 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.36■■□□□ 1.01
XRCC1P18887 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
XRCC1P18887 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
XRCC1P18887 AC092053.2-201ENST00000640557 1818 ntBASIC21.35■■□□□ 1.01
XRCC1P18887 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.35■■□□□ 1.01
XRCC1P18887 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.35■■□□□ 1.01
XRCC1P18887 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.35■■□□□ 1.01
XRCC1P18887 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
XRCC1P18887 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
XRCC1P18887 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.35■■□□□ 1.01
XRCC1P18887 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.34■■□□□ 1.01
XRCC1P18887 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.34■■□□□ 1.01
XRCC1P18887 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
XRCC1P18887 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
XRCC1P18887 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
XRCC1P18887 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
XRCC1P18887 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
XRCC1P18887 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
XRCC1P18887 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.34■■□□□ 1.01
XRCC1P18887 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.34■■□□□ 1.01
XRCC1P18887 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
XRCC1P18887 AC027612.3-201ENST00000413684 1047 ntBASIC21.34■■□□□ 1.01
XRCC1P18887 AC087239.1-201ENST00000622671 572 ntBASIC21.34■■□□□ 1.01
XRCC1P18887 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
XRCC1P18887 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
XRCC1P18887 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.34■■□□□ 1.01
XRCC1P18887 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
XRCC1P18887 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
XRCC1P18887 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
XRCC1P18887 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.34■■□□□ 1.01
XRCC1P18887 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
XRCC1P18887 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
XRCC1P18887 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
XRCC1P18887 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.33■■□□□ 1.01
XRCC1P18887 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
XRCC1P18887 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
XRCC1P18887 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
XRCC1P18887 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
XRCC1P18887 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
XRCC1P18887 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
XRCC1P18887 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
XRCC1P18887 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
XRCC1P18887 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
XRCC1P18887 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.33■■□□□ 1.01
XRCC1P18887 AC087623.3-201ENST00000607047 1098 ntBASIC21.33■■□□□ 1.01
XRCC1P18887 SLC25A24-204ENST00000569674 2357 ntBASIC21.33■■□□□ 1
XRCC1P18887 FBXW4P1-201ENST00000426721 2239 ntBASIC21.33■■□□□ 1
XRCC1P18887 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.33■■□□□ 1
XRCC1P18887 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.33■■□□□ 1
XRCC1P18887 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.33■■□□□ 1
XRCC1P18887 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.32■■□□□ 1
XRCC1P18887 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.32■■□□□ 1
XRCC1P18887 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
XRCC1P18887 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.32■■□□□ 1
XRCC1P18887 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
XRCC1P18887 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
XRCC1P18887 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.32■■□□□ 1
XRCC1P18887 YBX1P1-201ENST00000445822 960 ntBASIC21.32■■□□□ 1
XRCC1P18887 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.32■■□□□ 1
XRCC1P18887 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.32■■□□□ 1
XRCC1P18887 AC010141.3-201ENST00000456659 717 ntBASIC21.32■■□□□ 1
XRCC1P18887 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.32■■□□□ 1
XRCC1P18887 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
XRCC1P18887 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.32■■□□□ 1
XRCC1P18887 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.32■■□□□ 1
XRCC1P18887 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
XRCC1P18887 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.32■■□□□ 1
XRCC1P18887 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.31■■□□□ 1
XRCC1P18887 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
XRCC1P18887 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
XRCC1P18887 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
XRCC1P18887 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.31■■□□□ 1
XRCC1P18887 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.31■■□□□ 1
XRCC1P18887 AC123595.1-201ENST00000440769 1046 ntBASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms