Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCL4P13236 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCL4P13236 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
CCL4P13236 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.86
CCL4P13236 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.39■□□□□ 0.86
CCL4P13236 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.39■□□□□ 0.86
CCL4P13236 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCL4P13236 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCL4P13236 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCL4P13236 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCL4P13236 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CCL4P13236 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.39■□□□□ 0.85
CCL4P13236 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.39■□□□□ 0.85
CCL4P13236 AC010536.3-201ENST00000620306 533 ntBASIC20.39■□□□□ 0.85
CCL4P13236 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCL4P13236 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCL4P13236 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCL4P13236 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CCL4P13236 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCL4P13236 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.38■□□□□ 0.85
CCL4P13236 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.38■□□□□ 0.85
CCL4P13236 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.38■□□□□ 0.85
CCL4P13236 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCL4P13236 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CCL4P13236 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCL4P13236 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCL4P13236 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
CCL4P13236 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCL4P13236 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCL4P13236 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CCL4P13236 SLC29A4P1-201ENST00000398760 971 ntBASIC20.37■□□□□ 0.85
CCL4P13236 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCL4P13236 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.37■□□□□ 0.85
CCL4P13236 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CCL4P13236 KRT18P20-201ENST00000548986 1279 ntBASIC20.37■□□□□ 0.85
CCL4P13236 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.37■□□□□ 0.85
CCL4P13236 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
CCL4P13236 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CCL4P13236 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCL4P13236 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCL4P13236 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.37■□□□□ 0.85
CCL4P13236 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.36■□□□□ 0.85
CCL4P13236 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCL4P13236 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.36■□□□□ 0.85
CCL4P13236 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCL4P13236 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCL4P13236 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
CCL4P13236 TSPY20P-201ENST00000450910 630 ntBASIC20.36■□□□□ 0.85
CCL4P13236 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCL4P13236 AF201337.1-201ENST00000520239 748 ntBASIC20.36■□□□□ 0.85
CCL4P13236 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCL4P13236 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.36■□□□□ 0.85
CCL4P13236 TMEM191A-211ENST00000637163 1067 ntBASIC20.36■□□□□ 0.85
CCL4P13236 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.36■□□□□ 0.85
CCL4P13236 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.36■□□□□ 0.85
CCL4P13236 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCL4P13236 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCL4P13236 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CCL4P13236 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.35■□□□□ 0.85
CCL4P13236 KRT18P6-201ENST00000555540 1265 ntBASIC20.35■□□□□ 0.85
CCL4P13236 AC105036.2-201ENST00000569468 176 ntBASIC20.35■□□□□ 0.85
CCL4P13236 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.35■□□□□ 0.85
CCL4P13236 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.35■□□□□ 0.85
CCL4P13236 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
CCL4P13236 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCL4P13236 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCL4P13236 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CCL4P13236 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCL4P13236 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCL4P13236 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCL4P13236 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.34■□□□□ 0.85
CCL4P13236 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCL4P13236 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.34■□□□□ 0.85
CCL4P13236 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.34■□□□□ 0.85
CCL4P13236 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.34■□□□□ 0.85
CCL4P13236 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCL4P13236 AL034346.1-201ENST00000568244 1277 ntBASIC20.34■□□□□ 0.85
CCL4P13236 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CCL4P13236 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCL4P13236 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCL4P13236 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCL4P13236 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCL4P13236 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCL4P13236 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.34■□□□□ 0.85
CCL4P13236 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.34■□□□□ 0.85
CCL4P13236 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.33■□□□□ 0.85
CCL4P13236 AP006587.3-201ENST00000525742 1516 ntBASIC20.33■□□□□ 0.85
CCL4P13236 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCL4P13236 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.33■□□□□ 0.85
CCL4P13236 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.33■□□□□ 0.85
CCL4P13236 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCL4P13236 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.33■□□□□ 0.85
CCL4P13236 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.33■□□□□ 0.85
CCL4P13236 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.33■□□□□ 0.85
CCL4P13236 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.33■□□□□ 0.85
CCL4P13236 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CCL4P13236 EEF1DP3-203ENST00000566025 782 ntBASIC20.33■□□□□ 0.85
CCL4P13236 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCL4P13236 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.33■□□□□ 0.85
CCL4P13236 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms