Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC16.97■□□□□ 0.31
PF4V1P10720 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
PF4V1P10720 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC16.97■□□□□ 0.31
PF4V1P10720 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC16.97■□□□□ 0.31
PF4V1P10720 RARRES2P11-201ENST00000635158 484 ntBASIC16.97■□□□□ 0.31
PF4V1P10720 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC16.97■□□□□ 0.31
PF4V1P10720 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.97■□□□□ 0.31
PF4V1P10720 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PF4V1P10720 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PF4V1P10720 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PF4V1P10720 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PF4V1P10720 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PF4V1P10720 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
PF4V1P10720 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PF4V1P10720 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PF4V1P10720 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PF4V1P10720 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PF4V1P10720 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC16.96■□□□□ 0.31
PF4V1P10720 AC004911.1-201ENST00000416316 871 ntBASIC16.96■□□□□ 0.31
PF4V1P10720 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PF4V1P10720 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16.96■□□□□ 0.31
PF4V1P10720 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PF4V1P10720 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC16.96■□□□□ 0.31
PF4V1P10720 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PF4V1P10720 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PF4V1P10720 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PF4V1P10720 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PF4V1P10720 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PF4V1P10720 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PF4V1P10720 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC16.96■□□□□ 0.3
PF4V1P10720 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
PF4V1P10720 AC087742.1-201ENST00000575880 1738 ntBASIC16.96■□□□□ 0.3
PF4V1P10720 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
PF4V1P10720 ESRRAP2-201ENST00000418437 1549 ntBASIC16.96■□□□□ 0.3
PF4V1P10720 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PF4V1P10720 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PF4V1P10720 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC16.95■□□□□ 0.3
PF4V1P10720 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PF4V1P10720 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PF4V1P10720 AC079089.2-201ENST00000531211 1277 ntBASIC16.95■□□□□ 0.3
PF4V1P10720 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC16.95■□□□□ 0.3
PF4V1P10720 TERF1P2-201ENST00000583350 1212 ntBASIC16.95■□□□□ 0.3
PF4V1P10720 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PF4V1P10720 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PF4V1P10720 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PF4V1P10720 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PF4V1P10720 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC16.95■□□□□ 0.3
PF4V1P10720 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PF4V1P10720 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
PF4V1P10720 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PF4V1P10720 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PF4V1P10720 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PF4V1P10720 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC16.94■□□□□ 0.3
PF4V1P10720 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PF4V1P10720 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PF4V1P10720 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PF4V1P10720 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PF4V1P10720 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PF4V1P10720 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PF4V1P10720 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PF4V1P10720 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PF4V1P10720 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PF4V1P10720 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PF4V1P10720 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PF4V1P10720 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC16.94■□□□□ 0.3
PF4V1P10720 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PF4V1P10720 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PF4V1P10720 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PF4V1P10720 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PF4V1P10720 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PF4V1P10720 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
PF4V1P10720 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PF4V1P10720 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
PF4V1P10720 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC16.93■□□□□ 0.3
PF4V1P10720 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PF4V1P10720 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC16.93■□□□□ 0.3
PF4V1P10720 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC16.93■□□□□ 0.3
PF4V1P10720 OR7E47P-201ENST00000546390 1422 ntBASIC16.93■□□□□ 0.3
PF4V1P10720 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PF4V1P10720 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
PF4V1P10720 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PF4V1P10720 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PF4V1P10720 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PF4V1P10720 GALC-202ENST00000393568 2054 ntTSL 2 BASIC16.92■□□□□ 0.3
PF4V1P10720 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PF4V1P10720 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
PF4V1P10720 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PF4V1P10720 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC16.92■□□□□ 0.3
PF4V1P10720 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PF4V1P10720 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.92■□□□□ 0.3
PF4V1P10720 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC16.92■□□□□ 0.3
PF4V1P10720 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC16.92■□□□□ 0.3
PF4V1P10720 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC16.92■□□□□ 0.3
PF4V1P10720 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PF4V1P10720 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
PF4V1P10720 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PF4V1P10720 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
PF4V1P10720 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PF4V1P10720 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PF4V1P10720 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms