Protein–RNA interactions for Protein: P0DPA2

VSIG8, V-set and immunoglobulin domain-containing protein 8, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG8P0DPA2 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VSIG8P0DPA2 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
VSIG8P0DPA2 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VSIG8P0DPA2 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VSIG8P0DPA2 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
VSIG8P0DPA2 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VSIG8P0DPA2 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
VSIG8P0DPA2 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.36■□□□□ 0.53
VSIG8P0DPA2 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VSIG8P0DPA2 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VSIG8P0DPA2 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.36■□□□□ 0.53
VSIG8P0DPA2 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VSIG8P0DPA2 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VSIG8P0DPA2 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
VSIG8P0DPA2 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VSIG8P0DPA2 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
VSIG8P0DPA2 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VSIG8P0DPA2 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VSIG8P0DPA2 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
VSIG8P0DPA2 OR7E47P-201ENST00000546390 1422 ntBASIC18.35■□□□□ 0.53
VSIG8P0DPA2 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VSIG8P0DPA2 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VSIG8P0DPA2 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VSIG8P0DPA2 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
VSIG8P0DPA2 AC073130.3-201ENST00000624389 2278 ntBASIC18.35■□□□□ 0.53
VSIG8P0DPA2 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
VSIG8P0DPA2 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VSIG8P0DPA2 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.35■□□□□ 0.53
VSIG8P0DPA2 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VSIG8P0DPA2 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.35■□□□□ 0.53
VSIG8P0DPA2 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.35■□□□□ 0.53
VSIG8P0DPA2 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.34■□□□□ 0.53
VSIG8P0DPA2 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.34■□□□□ 0.53
VSIG8P0DPA2 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
VSIG8P0DPA2 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.34■□□□□ 0.53
VSIG8P0DPA2 AC104564.3-201ENST00000582367 638 ntBASIC18.34■□□□□ 0.53
VSIG8P0DPA2 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
VSIG8P0DPA2 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.34■□□□□ 0.53
VSIG8P0DPA2 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VSIG8P0DPA2 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
VSIG8P0DPA2 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VSIG8P0DPA2 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
VSIG8P0DPA2 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.34■□□□□ 0.53
VSIG8P0DPA2 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VSIG8P0DPA2 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VSIG8P0DPA2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
VSIG8P0DPA2 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VSIG8P0DPA2 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VSIG8P0DPA2 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
VSIG8P0DPA2 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VSIG8P0DPA2 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.33■□□□□ 0.53
VSIG8P0DPA2 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
VSIG8P0DPA2 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
VSIG8P0DPA2 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VSIG8P0DPA2 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.53
VSIG8P0DPA2 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.33■□□□□ 0.53
VSIG8P0DPA2 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VSIG8P0DPA2 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.33■□□□□ 0.52
VSIG8P0DPA2 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.33■□□□□ 0.52
VSIG8P0DPA2 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VSIG8P0DPA2 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.33■□□□□ 0.52
VSIG8P0DPA2 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VSIG8P0DPA2 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.33■□□□□ 0.52
VSIG8P0DPA2 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VSIG8P0DPA2 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.33■□□□□ 0.52
VSIG8P0DPA2 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
VSIG8P0DPA2 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.32■□□□□ 0.52
VSIG8P0DPA2 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.32■□□□□ 0.52
VSIG8P0DPA2 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VSIG8P0DPA2 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.32■□□□□ 0.52
VSIG8P0DPA2 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
VSIG8P0DPA2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
VSIG8P0DPA2 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
VSIG8P0DPA2 AC006455.2-201ENST00000429931 906 ntBASIC18.32■□□□□ 0.52
VSIG8P0DPA2 AC009299.2-201ENST00000482477 511 ntBASIC18.32■□□□□ 0.52
VSIG8P0DPA2 pRNA.6-201ENST00000610482 90 ntBASIC18.32■□□□□ 0.52
VSIG8P0DPA2 pRNA.5-201ENST00000612139 90 ntBASIC18.32■□□□□ 0.52
VSIG8P0DPA2 MIR6724-1-201ENST00000616420 92 ntBASIC18.32■□□□□ 0.52
VSIG8P0DPA2 MIR6724-2-201ENST00000616483 92 ntBASIC18.32■□□□□ 0.52
VSIG8P0DPA2 MIR6724-4-201ENST00000617390 92 ntBASIC18.32■□□□□ 0.52
VSIG8P0DPA2 pRNA.11-201ENST00000618423 90 ntBASIC18.32■□□□□ 0.52
VSIG8P0DPA2 pRNA.13-201ENST00000619112 90 ntBASIC18.32■□□□□ 0.52
VSIG8P0DPA2 MIR6724-3-201ENST00000622482 92 ntBASIC18.32■□□□□ 0.52
VSIG8P0DPA2 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
VSIG8P0DPA2 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.32■□□□□ 0.52
VSIG8P0DPA2 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VSIG8P0DPA2 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VSIG8P0DPA2 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
VSIG8P0DPA2 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VSIG8P0DPA2 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VSIG8P0DPA2 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
VSIG8P0DPA2 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
VSIG8P0DPA2 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
VSIG8P0DPA2 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
VSIG8P0DPA2 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VSIG8P0DPA2 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VSIG8P0DPA2 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VSIG8P0DPA2 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VSIG8P0DPA2 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VSIG8P0DPA2 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms