Protein–RNA interactions for Protein: P0CX60

TY1A-PR2, Transposon Ty1-PR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-PR2P0CX60 YCK3YER123W 1575 nt5.94□□□□□ -1.46
TY1A-PR2P0CX60 ADY2YCR010C 852 nt5.94□□□□□ -1.46
TY1A-PR2P0CX60 YCR101CYCR101C 549 nt5.94□□□□□ -1.46
TY1A-PR2P0CX60 ARF2YDL137W 546 nt5.94□□□□□ -1.46
TY1A-PR2P0CX60 YIR020CYIR020C 303 nt5.94□□□□□ -1.46
TY1A-PR2P0CX60 YLR031WYLR031W 561 nt5.94□□□□□ -1.46
TY1A-PR2P0CX60 YML018CYML018C 1182 nt5.94□□□□□ -1.46
TY1A-PR2P0CX60 TAF14YPL129W 735 nt5.94□□□□□ -1.46
TY1A-PR2P0CX60 SKI2YLR398C 3864 nt5.94□□□□□ -1.46
TY1A-PR2P0CX60 HRR25YPL204W 1485 nt5.94□□□□□ -1.46
TY1A-PR2P0CX60 ARB1YER036C 1833 nt5.94□□□□□ -1.46
TY1A-PR2P0CX60 CHA4YLR098C 1947 nt5.93□□□□□ -1.46
TY1A-PR2P0CX60 EMW1YNL313C 2715 nt5.93□□□□□ -1.46
TY1A-PR2P0CX60 ASI3YNL008C 2031 nt5.93□□□□□ -1.46
TY1A-PR2P0CX60 YER038W-AYER038W-A 381 nt5.93□□□□□ -1.46
TY1A-PR2P0CX60 CIS3YJL158C 684 nt5.93□□□□□ -1.46
TY1A-PR2P0CX60 RPL17BYJL177W 555 nt5.93□□□□□ -1.46
TY1A-PR2P0CX60 UTP11YKL099C 753 nt5.93□□□□□ -1.46
TY1A-PR2P0CX60 SMA2YML066C 1110 nt5.93□□□□□ -1.46
TY1A-PR2P0CX60 ISF1YMR081C 1017 nt5.93□□□□□ -1.46
TY1A-PR2P0CX60 YBR032WYBR032W 303 nt5.93□□□□□ -1.46
TY1A-PR2P0CX60 ERO1YML130C 1692 nt5.93□□□□□ -1.46
TY1A-PR2P0CX60 SUB2YDL084W 1341 nt5.93□□□□□ -1.46
TY1A-PR2P0CX60 YBR012W-AYBR012W-A 1323 nt5.93□□□□□ -1.46
TY1A-PR2P0CX60 YOR142W-AYOR142W-A 1323 nt5.93□□□□□ -1.46
TY1A-PR2P0CX60 YPR158W-AYPR158W-A 1323 nt5.93□□□□□ -1.46
TY1A-PR2P0CX60 GPB1YOR371C 2694 nt5.92□□□□□ -1.46
TY1A-PR2P0CX60 MDL1YLR188W 2088 nt5.92□□□□□ -1.46
TY1A-PR2P0CX60 UTP9YHR196W 1728 nt5.92□□□□□ -1.46
TY1A-PR2P0CX60 GCS1YDL226C 1059 nt5.92□□□□□ -1.46
TY1A-PR2P0CX60 TFB3YDR460W 966 nt5.92□□□□□ -1.46
TY1A-PR2P0CX60 RSM25YIL093C 795 nt5.92□□□□□ -1.46
TY1A-PR2P0CX60 RDN5-2RDN5-2 119 nt5.92□□□□□ -1.46
TY1A-PR2P0CX60 RDN5-3RDN5-3 119 nt5.92□□□□□ -1.46
TY1A-PR2P0CX60 RDN5-4RDN5-4 119 nt5.92□□□□□ -1.46
TY1A-PR2P0CX60 RDN5-5RDN5-5 119 nt5.92□□□□□ -1.46
TY1A-PR2P0CX60 SUP35YDR172W 2058 nt5.92□□□□□ -1.46
TY1A-PR2P0CX60 VPS33YLR396C 2076 nt5.92□□□□□ -1.46
TY1A-PR2P0CX60 POP1YNL221C 2628 nt5.91□□□□□ -1.46
TY1A-PR2P0CX60 SAE2YGL175C 1038 nt5.91□□□□□ -1.46
TY1A-PR2P0CX60 VTI1YMR197C 654 nt5.91□□□□□ -1.46
TY1A-PR2P0CX60 YMR307C-AYMR307C-A 195 nt5.91□□□□□ -1.46
TY1A-PR2P0CX60 HEM4YOR278W 828 nt5.91□□□□□ -1.46
TY1A-PR2P0CX60 RDL2YOR286W 450 nt5.91□□□□□ -1.46
TY1A-PR2P0CX60 CAM1YPL048W 1248 nt5.91□□□□□ -1.46
TY1A-PR2P0CX60 YPL135C-AYPL135C-A 174 nt5.91□□□□□ -1.46
TY1A-PR2P0CX60 VHR1YIL056W 1923 nt5.91□□□□□ -1.46
TY1A-PR2P0CX60 NGL3YML118W 1518 nt5.9□□□□□ -1.46
TY1A-PR2P0CX60 YIL055CYIL055C 1884 nt5.9□□□□□ -1.46
TY1A-PR2P0CX60 YER079C-AYER079C-A 339 nt5.9□□□□□ -1.46
TY1A-PR2P0CX60 VOA1YGR106C 798 nt5.9□□□□□ -1.46
TY1A-PR2P0CX60 RNR4YGR180C 1038 nt5.9□□□□□ -1.46
TY1A-PR2P0CX60 BET5YML077W 480 nt5.9□□□□□ -1.46
TY1A-PR2P0CX60 RAD14YMR201C 1116 nt5.9□□□□□ -1.46
TY1A-PR2P0CX60 INN1YNL152W 1230 nt5.9□□□□□ -1.46
TY1A-PR2P0CX60 NRM1YNR009W 750 nt5.9□□□□□ -1.46
TY1A-PR2P0CX60 YPL107WYPL107W 747 nt5.9□□□□□ -1.46
TY1A-PR2P0CX60 DER1YBR201W 636 nt5.9□□□□□ -1.46
TY1A-PR2P0CX60 IMA5YJL216C 1746 nt5.9□□□□□ -1.47
TY1A-PR2P0CX60 NTH1YDR001C 2256 nt5.9□□□□□ -1.47
TY1A-PR2P0CX60 PAC2YER007W 1557 nt5.89□□□□□ -1.47
TY1A-PR2P0CX60 APS3YJL024C 585 nt5.89□□□□□ -1.47
TY1A-PR2P0CX60 YKL107WYKL107W 930 nt5.89□□□□□ -1.47
TY1A-PR2P0CX60 NOP15YNL110C 663 nt5.89□□□□□ -1.47
TY1A-PR2P0CX60 RPL18AYOL120C 561 nt5.89□□□□□ -1.47
TY1A-PR2P0CX60 CDC33YOL139C 642 nt5.89□□□□□ -1.47
TY1A-PR2P0CX60 YPL152W-AYPL152W-A 99 nt5.89□□□□□ -1.47
TY1A-PR2P0CX60 PTK2YJR059W 2457 nt5.89□□□□□ -1.47
TY1A-PR2P0CX60 BFR1YOR198C 1413 nt5.89□□□□□ -1.47
TY1A-PR2P0CX60 YDL009CYDL009C 324 nt5.88□□□□□ -1.47
TY1A-PR2P0CX60 SUF3tG(CCC)D 72 nt5.88□□□□□ -1.47
TY1A-PR2P0CX60 THR1YHR025W 1074 nt5.88□□□□□ -1.47
TY1A-PR2P0CX60 YKL070WYKL070W 510 nt5.88□□□□□ -1.47
TY1A-PR2P0CX60 RHO4YKR055W 876 nt5.88□□□□□ -1.47
TY1A-PR2P0CX60 ATP14YLR295C 375 nt5.88□□□□□ -1.47
TY1A-PR2P0CX60 YLR434CYLR434C 384 nt5.88□□□□□ -1.47
TY1A-PR2P0CX60 PAI3YMR174C 207 nt5.88□□□□□ -1.47
TY1A-PR2P0CX60 TRM112YNR046W 408 nt5.88□□□□□ -1.47
TY1A-PR2P0CX60 TUF1YOR187W 1314 nt5.88□□□□□ -1.47
TY1A-PR2P0CX60 ERG1YGR175C 1491 nt5.88□□□□□ -1.47
TY1A-PR2P0CX60 DAL5YJR152W 1632 nt5.88□□□□□ -1.47
TY1A-PR2P0CX60 YER023C-AYER023C-A 213 nt5.87□□□□□ -1.47
TY1A-PR2P0CX60 RPL1BYGL135W 654 nt5.87□□□□□ -1.47
TY1A-PR2P0CX60 REE1YJL217W 597 nt5.87□□□□□ -1.47
TY1A-PR2P0CX60 EMC2YJR088C 879 nt5.87□□□□□ -1.47
TY1A-PR2P0CX60 YLL044WYLL044W 447 nt5.87□□□□□ -1.47
TY1A-PR2P0CX60 YBL039W-BYBL039W-B 180 nt5.87□□□□□ -1.47
TY1A-PR2P0CX60 COX5AYNL052W 462 nt5.87□□□□□ -1.47
TY1A-PR2P0CX60 YNL092WYNL092W 1203 nt5.87□□□□□ -1.47
TY1A-PR2P0CX60 RPL1AYPL220W 654 nt5.87□□□□□ -1.47
TY1A-PR2P0CX60 snR36snR36 182 nt5.87□□□□□ -1.47
TY1A-PR2P0CX60 BRN1YBL097W 2265 nt5.87□□□□□ -1.47
TY1A-PR2P0CX60 STB5YHR178W 2232 nt5.86□□□□□ -1.47
TY1A-PR2P0CX60 HSP82YPL240C 2130 nt5.86□□□□□ -1.47
TY1A-PR2P0CX60 SWC4YGR002C 1431 nt5.86□□□□□ -1.47
TY1A-PR2P0CX60 tA(AGC)DtA(AGC)D 73 nt5.86□□□□□ -1.47
TY1A-PR2P0CX60 tA(AGC)FtA(AGC)F 73 nt5.86□□□□□ -1.47
TY1A-PR2P0CX60 tA(AGC)GtA(AGC)G 73 nt5.86□□□□□ -1.47
TY1A-PR2P0CX60 tA(AGC)HtA(AGC)H 73 nt5.86□□□□□ -1.47
TY1A-PR2P0CX60 tA(AGC)JtA(AGC)J 73 nt5.86□□□□□ -1.47
Retrieved 100 of 7,029 protein–RNA pairs in 16.1 ms