Protein–RNA interactions for Protein: P0CX59

TY1A-OR, Transposon Ty1-OR Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-ORP0CX59 YCK3YER123W 1575 nt5.94□□□□□ -1.46
TY1A-ORP0CX59 ADY2YCR010C 852 nt5.94□□□□□ -1.46
TY1A-ORP0CX59 YCR101CYCR101C 549 nt5.94□□□□□ -1.46
TY1A-ORP0CX59 ARF2YDL137W 546 nt5.94□□□□□ -1.46
TY1A-ORP0CX59 YIR020CYIR020C 303 nt5.94□□□□□ -1.46
TY1A-ORP0CX59 YLR031WYLR031W 561 nt5.94□□□□□ -1.46
TY1A-ORP0CX59 YML018CYML018C 1182 nt5.94□□□□□ -1.46
TY1A-ORP0CX59 TAF14YPL129W 735 nt5.94□□□□□ -1.46
TY1A-ORP0CX59 SKI2YLR398C 3864 nt5.94□□□□□ -1.46
TY1A-ORP0CX59 HRR25YPL204W 1485 nt5.94□□□□□ -1.46
TY1A-ORP0CX59 ARB1YER036C 1833 nt5.94□□□□□ -1.46
TY1A-ORP0CX59 CHA4YLR098C 1947 nt5.93□□□□□ -1.46
TY1A-ORP0CX59 EMW1YNL313C 2715 nt5.93□□□□□ -1.46
TY1A-ORP0CX59 ASI3YNL008C 2031 nt5.93□□□□□ -1.46
TY1A-ORP0CX59 YER038W-AYER038W-A 381 nt5.93□□□□□ -1.46
TY1A-ORP0CX59 CIS3YJL158C 684 nt5.93□□□□□ -1.46
TY1A-ORP0CX59 RPL17BYJL177W 555 nt5.93□□□□□ -1.46
TY1A-ORP0CX59 UTP11YKL099C 753 nt5.93□□□□□ -1.46
TY1A-ORP0CX59 SMA2YML066C 1110 nt5.93□□□□□ -1.46
TY1A-ORP0CX59 ISF1YMR081C 1017 nt5.93□□□□□ -1.46
TY1A-ORP0CX59 YBR032WYBR032W 303 nt5.93□□□□□ -1.46
TY1A-ORP0CX59 ERO1YML130C 1692 nt5.93□□□□□ -1.46
TY1A-ORP0CX59 SUB2YDL084W 1341 nt5.93□□□□□ -1.46
TY1A-ORP0CX59 YBR012W-AYBR012W-A 1323 nt5.93□□□□□ -1.46
TY1A-ORP0CX59 YOR142W-AYOR142W-A 1323 nt5.93□□□□□ -1.46
TY1A-ORP0CX59 YPR158W-AYPR158W-A 1323 nt5.93□□□□□ -1.46
TY1A-ORP0CX59 GPB1YOR371C 2694 nt5.92□□□□□ -1.46
TY1A-ORP0CX59 MDL1YLR188W 2088 nt5.92□□□□□ -1.46
TY1A-ORP0CX59 UTP9YHR196W 1728 nt5.92□□□□□ -1.46
TY1A-ORP0CX59 GCS1YDL226C 1059 nt5.92□□□□□ -1.46
TY1A-ORP0CX59 TFB3YDR460W 966 nt5.92□□□□□ -1.46
TY1A-ORP0CX59 RSM25YIL093C 795 nt5.92□□□□□ -1.46
TY1A-ORP0CX59 RDN5-2RDN5-2 119 nt5.92□□□□□ -1.46
TY1A-ORP0CX59 RDN5-3RDN5-3 119 nt5.92□□□□□ -1.46
TY1A-ORP0CX59 RDN5-4RDN5-4 119 nt5.92□□□□□ -1.46
TY1A-ORP0CX59 RDN5-5RDN5-5 119 nt5.92□□□□□ -1.46
TY1A-ORP0CX59 SUP35YDR172W 2058 nt5.92□□□□□ -1.46
TY1A-ORP0CX59 VPS33YLR396C 2076 nt5.92□□□□□ -1.46
TY1A-ORP0CX59 POP1YNL221C 2628 nt5.91□□□□□ -1.46
TY1A-ORP0CX59 SAE2YGL175C 1038 nt5.91□□□□□ -1.46
TY1A-ORP0CX59 VTI1YMR197C 654 nt5.91□□□□□ -1.46
TY1A-ORP0CX59 YMR307C-AYMR307C-A 195 nt5.91□□□□□ -1.46
TY1A-ORP0CX59 HEM4YOR278W 828 nt5.91□□□□□ -1.46
TY1A-ORP0CX59 RDL2YOR286W 450 nt5.91□□□□□ -1.46
TY1A-ORP0CX59 CAM1YPL048W 1248 nt5.91□□□□□ -1.46
TY1A-ORP0CX59 YPL135C-AYPL135C-A 174 nt5.91□□□□□ -1.46
TY1A-ORP0CX59 VHR1YIL056W 1923 nt5.91□□□□□ -1.46
TY1A-ORP0CX59 NGL3YML118W 1518 nt5.9□□□□□ -1.46
TY1A-ORP0CX59 YIL055CYIL055C 1884 nt5.9□□□□□ -1.46
TY1A-ORP0CX59 YER079C-AYER079C-A 339 nt5.9□□□□□ -1.46
TY1A-ORP0CX59 VOA1YGR106C 798 nt5.9□□□□□ -1.46
TY1A-ORP0CX59 RNR4YGR180C 1038 nt5.9□□□□□ -1.46
TY1A-ORP0CX59 BET5YML077W 480 nt5.9□□□□□ -1.46
TY1A-ORP0CX59 RAD14YMR201C 1116 nt5.9□□□□□ -1.46
TY1A-ORP0CX59 INN1YNL152W 1230 nt5.9□□□□□ -1.46
TY1A-ORP0CX59 NRM1YNR009W 750 nt5.9□□□□□ -1.46
TY1A-ORP0CX59 YPL107WYPL107W 747 nt5.9□□□□□ -1.46
TY1A-ORP0CX59 DER1YBR201W 636 nt5.9□□□□□ -1.46
TY1A-ORP0CX59 IMA5YJL216C 1746 nt5.9□□□□□ -1.47
TY1A-ORP0CX59 NTH1YDR001C 2256 nt5.9□□□□□ -1.47
TY1A-ORP0CX59 PAC2YER007W 1557 nt5.89□□□□□ -1.47
TY1A-ORP0CX59 APS3YJL024C 585 nt5.89□□□□□ -1.47
TY1A-ORP0CX59 YKL107WYKL107W 930 nt5.89□□□□□ -1.47
TY1A-ORP0CX59 NOP15YNL110C 663 nt5.89□□□□□ -1.47
TY1A-ORP0CX59 RPL18AYOL120C 561 nt5.89□□□□□ -1.47
TY1A-ORP0CX59 CDC33YOL139C 642 nt5.89□□□□□ -1.47
TY1A-ORP0CX59 YPL152W-AYPL152W-A 99 nt5.89□□□□□ -1.47
TY1A-ORP0CX59 PTK2YJR059W 2457 nt5.89□□□□□ -1.47
TY1A-ORP0CX59 BFR1YOR198C 1413 nt5.89□□□□□ -1.47
TY1A-ORP0CX59 YDL009CYDL009C 324 nt5.88□□□□□ -1.47
TY1A-ORP0CX59 SUF3tG(CCC)D 72 nt5.88□□□□□ -1.47
TY1A-ORP0CX59 THR1YHR025W 1074 nt5.88□□□□□ -1.47
TY1A-ORP0CX59 YKL070WYKL070W 510 nt5.88□□□□□ -1.47
TY1A-ORP0CX59 RHO4YKR055W 876 nt5.88□□□□□ -1.47
TY1A-ORP0CX59 ATP14YLR295C 375 nt5.88□□□□□ -1.47
TY1A-ORP0CX59 YLR434CYLR434C 384 nt5.88□□□□□ -1.47
TY1A-ORP0CX59 PAI3YMR174C 207 nt5.88□□□□□ -1.47
TY1A-ORP0CX59 TRM112YNR046W 408 nt5.88□□□□□ -1.47
TY1A-ORP0CX59 TUF1YOR187W 1314 nt5.88□□□□□ -1.47
TY1A-ORP0CX59 ERG1YGR175C 1491 nt5.88□□□□□ -1.47
TY1A-ORP0CX59 DAL5YJR152W 1632 nt5.88□□□□□ -1.47
TY1A-ORP0CX59 YER023C-AYER023C-A 213 nt5.87□□□□□ -1.47
TY1A-ORP0CX59 RPL1BYGL135W 654 nt5.87□□□□□ -1.47
TY1A-ORP0CX59 REE1YJL217W 597 nt5.87□□□□□ -1.47
TY1A-ORP0CX59 EMC2YJR088C 879 nt5.87□□□□□ -1.47
TY1A-ORP0CX59 YLL044WYLL044W 447 nt5.87□□□□□ -1.47
TY1A-ORP0CX59 YBL039W-BYBL039W-B 180 nt5.87□□□□□ -1.47
TY1A-ORP0CX59 COX5AYNL052W 462 nt5.87□□□□□ -1.47
TY1A-ORP0CX59 YNL092WYNL092W 1203 nt5.87□□□□□ -1.47
TY1A-ORP0CX59 RPL1AYPL220W 654 nt5.87□□□□□ -1.47
TY1A-ORP0CX59 snR36snR36 182 nt5.87□□□□□ -1.47
TY1A-ORP0CX59 BRN1YBL097W 2265 nt5.87□□□□□ -1.47
TY1A-ORP0CX59 STB5YHR178W 2232 nt5.86□□□□□ -1.47
TY1A-ORP0CX59 HSP82YPL240C 2130 nt5.86□□□□□ -1.47
TY1A-ORP0CX59 SWC4YGR002C 1431 nt5.86□□□□□ -1.47
TY1A-ORP0CX59 tA(AGC)DtA(AGC)D 73 nt5.86□□□□□ -1.47
TY1A-ORP0CX59 tA(AGC)FtA(AGC)F 73 nt5.86□□□□□ -1.47
TY1A-ORP0CX59 tA(AGC)GtA(AGC)G 73 nt5.86□□□□□ -1.47
TY1A-ORP0CX59 tA(AGC)HtA(AGC)H 73 nt5.86□□□□□ -1.47
TY1A-ORP0CX59 tA(AGC)JtA(AGC)J 73 nt5.86□□□□□ -1.47
Retrieved 100 of 7,029 protein–RNA pairs in 20.8 ms