Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
CHRNA1P02708 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
CHRNA1P02708 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC23.53■■□□□ 1.36
CHRNA1P02708 KRT18P20-201ENST00000548986 1279 ntBASIC23.53■■□□□ 1.36
CHRNA1P02708 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
CHRNA1P02708 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
CHRNA1P02708 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.53■■□□□ 1.36
CHRNA1P02708 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
CHRNA1P02708 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC23.53■■□□□ 1.36
CHRNA1P02708 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CHRNA1P02708 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
CHRNA1P02708 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CHRNA1P02708 APTR-205ENST00000447009 902 ntTSL 2 BASIC23.52■■□□□ 1.36
CHRNA1P02708 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC23.52■■□□□ 1.36
CHRNA1P02708 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
CHRNA1P02708 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.52■■□□□ 1.36
CHRNA1P02708 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC23.52■■□□□ 1.36
CHRNA1P02708 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CHRNA1P02708 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
CHRNA1P02708 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC23.51■■□□□ 1.35
CHRNA1P02708 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CHRNA1P02708 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
CHRNA1P02708 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CHRNA1P02708 AC010536.3-201ENST00000620306 533 ntBASIC23.51■■□□□ 1.35
CHRNA1P02708 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CHRNA1P02708 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
CHRNA1P02708 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC23.5■■□□□ 1.35
CHRNA1P02708 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CHRNA1P02708 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
CHRNA1P02708 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
CHRNA1P02708 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
CHRNA1P02708 EEF1DP3-203ENST00000566025 782 ntBASIC23.5■■□□□ 1.35
CHRNA1P02708 AL138781.1-201ENST00000566567 1274 ntBASIC23.5■■□□□ 1.35
CHRNA1P02708 AL034346.1-201ENST00000568244 1277 ntBASIC23.5■■□□□ 1.35
CHRNA1P02708 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC23.5■■□□□ 1.35
CHRNA1P02708 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CHRNA1P02708 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CHRNA1P02708 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.5■■□□□ 1.35
CHRNA1P02708 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CHRNA1P02708 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CHRNA1P02708 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CHRNA1P02708 AP006587.3-201ENST00000525742 1516 ntBASIC23.49■■□□□ 1.35
CHRNA1P02708 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
CHRNA1P02708 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CHRNA1P02708 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
CHRNA1P02708 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
CHRNA1P02708 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CHRNA1P02708 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
CHRNA1P02708 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC23.49■■□□□ 1.35
CHRNA1P02708 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
CHRNA1P02708 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CHRNA1P02708 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CHRNA1P02708 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CHRNA1P02708 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CHRNA1P02708 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC23.48■■□□□ 1.35
CHRNA1P02708 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CHRNA1P02708 AC087742.1-201ENST00000575880 1738 ntBASIC23.48■■□□□ 1.35
CHRNA1P02708 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC23.48■■□□□ 1.35
CHRNA1P02708 NAA20-201ENST00000310450 920 ntTSL 2 BASIC23.48■■□□□ 1.35
CHRNA1P02708 UQCRFS1P1-201ENST00000435169 820 ntBASIC23.48■■□□□ 1.35
CHRNA1P02708 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC23.48■■□□□ 1.35
CHRNA1P02708 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC23.48■■□□□ 1.35
CHRNA1P02708 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC23.48■■□□□ 1.35
CHRNA1P02708 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC23.48■■□□□ 1.35
CHRNA1P02708 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC23.48■■□□□ 1.35
CHRNA1P02708 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CHRNA1P02708 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.48■■□□□ 1.35
CHRNA1P02708 AC137767.1-201ENST00000602918 1920 ntBASIC23.47■■□□□ 1.35
CHRNA1P02708 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC23.47■■□□□ 1.35
CHRNA1P02708 CD99P1-205ENST00000527459 561 ntBASIC23.47■■□□□ 1.35
CHRNA1P02708 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
CHRNA1P02708 KLF13-207ENST00000560473 489 ntTSL 3 BASIC23.47■■□□□ 1.35
CHRNA1P02708 AC053503.5-201ENST00000601508 636 ntBASIC23.47■■□□□ 1.35
CHRNA1P02708 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC23.47■■□□□ 1.35
CHRNA1P02708 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
CHRNA1P02708 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CHRNA1P02708 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CHRNA1P02708 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.47■■□□□ 1.35
CHRNA1P02708 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC23.47■■□□□ 1.35
CHRNA1P02708 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CHRNA1P02708 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
CHRNA1P02708 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CHRNA1P02708 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CHRNA1P02708 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
CHRNA1P02708 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC23.46■■□□□ 1.35
CHRNA1P02708 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
CHRNA1P02708 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CHRNA1P02708 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC23.46■■□□□ 1.35
CHRNA1P02708 APTR-203ENST00000430801 583 ntTSL 5 BASIC23.46■■□□□ 1.35
CHRNA1P02708 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.46■■□□□ 1.35
CHRNA1P02708 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
CHRNA1P02708 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC23.46■■□□□ 1.35
CHRNA1P02708 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC23.46■■□□□ 1.35
CHRNA1P02708 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
CHRNA1P02708 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
CHRNA1P02708 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC23.45■■□□□ 1.34
CHRNA1P02708 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CHRNA1P02708 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC23.45■■□□□ 1.34
CHRNA1P02708 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CHRNA1P02708 SLC7A5P1-201ENST00000568957 537 ntBASIC23.45■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms