Protein–RNA interactions for Protein: P02100

HBE1, Hemoglobin subunit epsilon, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HBE1P02100 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
HBE1P02100 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HBE1P02100 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
HBE1P02100 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
HBE1P02100 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HBE1P02100 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HBE1P02100 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
HBE1P02100 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC17.18■□□□□ 0.34
HBE1P02100 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HBE1P02100 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HBE1P02100 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
HBE1P02100 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
HBE1P02100 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HBE1P02100 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HBE1P02100 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HBE1P02100 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC17.17■□□□□ 0.34
HBE1P02100 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC17.17■□□□□ 0.34
HBE1P02100 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC17.17■□□□□ 0.34
HBE1P02100 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HBE1P02100 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
HBE1P02100 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HBE1P02100 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.17■□□□□ 0.34
HBE1P02100 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HBE1P02100 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HBE1P02100 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HBE1P02100 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HBE1P02100 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HBE1P02100 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HBE1P02100 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HBE1P02100 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HBE1P02100 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
HBE1P02100 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HBE1P02100 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HBE1P02100 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HBE1P02100 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
HBE1P02100 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HBE1P02100 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HBE1P02100 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.16■□□□□ 0.34
HBE1P02100 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
HBE1P02100 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
HBE1P02100 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HBE1P02100 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HBE1P02100 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.16■□□□□ 0.34
HBE1P02100 LINC01006-201ENST00000333319 2292 ntBASIC17.16■□□□□ 0.34
HBE1P02100 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HBE1P02100 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.15■□□□□ 0.34
HBE1P02100 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HBE1P02100 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.15■□□□□ 0.34
HBE1P02100 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
HBE1P02100 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC17.15■□□□□ 0.34
HBE1P02100 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
HBE1P02100 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
HBE1P02100 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HBE1P02100 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
HBE1P02100 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC17.15■□□□□ 0.34
HBE1P02100 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC17.15■□□□□ 0.34
HBE1P02100 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HBE1P02100 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
HBE1P02100 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
HBE1P02100 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
HBE1P02100 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HBE1P02100 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HBE1P02100 AF106564.1-201ENST00000607058 2553 ntBASIC17.15■□□□□ 0.34
HBE1P02100 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.15■□□□□ 0.34
HBE1P02100 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.15■□□□□ 0.34
HBE1P02100 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HBE1P02100 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
HBE1P02100 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
HBE1P02100 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HBE1P02100 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
HBE1P02100 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HBE1P02100 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HBE1P02100 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HBE1P02100 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
HBE1P02100 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HBE1P02100 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC17.14■□□□□ 0.33
HBE1P02100 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HBE1P02100 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC17.14■□□□□ 0.33
HBE1P02100 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HBE1P02100 MTX2-204ENST00000443241 799 ntTSL 3 BASIC17.14■□□□□ 0.33
HBE1P02100 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HBE1P02100 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HBE1P02100 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.14■□□□□ 0.33
HBE1P02100 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HBE1P02100 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HBE1P02100 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HBE1P02100 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HBE1P02100 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
HBE1P02100 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HBE1P02100 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HBE1P02100 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HBE1P02100 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HBE1P02100 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC17.13■□□□□ 0.33
HBE1P02100 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC17.13■□□□□ 0.33
HBE1P02100 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
HBE1P02100 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HBE1P02100 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
HBE1P02100 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.13■□□□□ 0.33
HBE1P02100 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HBE1P02100 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms