Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CNOT4O95628 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.02■□□□□ 0.64
CNOT4O95628 CCDC92B-201ENST00000575506 885 ntBASIC19.02■□□□□ 0.64
CNOT4O95628 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CNOT4O95628 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.02■□□□□ 0.64
CNOT4O95628 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CNOT4O95628 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
CNOT4O95628 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CNOT4O95628 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CNOT4O95628 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.01■□□□□ 0.63
CNOT4O95628 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNOT4O95628 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CNOT4O95628 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CNOT4O95628 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNOT4O95628 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNOT4O95628 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNOT4O95628 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNOT4O95628 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNOT4O95628 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CNOT4O95628 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CNOT4O95628 KRT18P14-201ENST00000534205 1250 ntBASIC19.01■□□□□ 0.63
CNOT4O95628 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.01■□□□□ 0.63
CNOT4O95628 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.01■□□□□ 0.63
CNOT4O95628 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.01■□□□□ 0.63
CNOT4O95628 AC137767.1-201ENST00000602918 1920 ntBASIC19.01■□□□□ 0.63
CNOT4O95628 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNOT4O95628 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNOT4O95628 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CNOT4O95628 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNOT4O95628 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19■□□□□ 0.63
CNOT4O95628 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19■□□□□ 0.63
CNOT4O95628 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNOT4O95628 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19■□□□□ 0.63
CNOT4O95628 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19■□□□□ 0.63
CNOT4O95628 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNOT4O95628 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNOT4O95628 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNOT4O95628 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNOT4O95628 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNOT4O95628 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNOT4O95628 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNOT4O95628 LINC00526-201ENST00000581067 1875 ntBASIC18.99■□□□□ 0.63
CNOT4O95628 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.99■□□□□ 0.63
CNOT4O95628 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNOT4O95628 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CNOT4O95628 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.99■□□□□ 0.63
CNOT4O95628 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CNOT4O95628 DUX4L2-201ENST00000561772 1275 ntBASIC18.99■□□□□ 0.63
CNOT4O95628 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.99■□□□□ 0.63
CNOT4O95628 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.99■□□□□ 0.63
CNOT4O95628 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.99■□□□□ 0.63
CNOT4O95628 DUX4L6-201ENST00000626483 1275 ntBASIC18.99■□□□□ 0.63
CNOT4O95628 DUX4L1-201ENST00000627662 1275 ntBASIC18.99■□□□□ 0.63
CNOT4O95628 DUX4L8-201ENST00000629013 1275 ntBASIC18.99■□□□□ 0.63
CNOT4O95628 DUX4L3-201ENST00000630187 1275 ntBASIC18.99■□□□□ 0.63
CNOT4O95628 DUX4L7-201ENST00000630678 1275 ntBASIC18.99■□□□□ 0.63
CNOT4O95628 DUX4L5-201ENST00000630834 1275 ntBASIC18.99■□□□□ 0.63
CNOT4O95628 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
CNOT4O95628 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNOT4O95628 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CNOT4O95628 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CNOT4O95628 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CNOT4O95628 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNOT4O95628 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CNOT4O95628 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.98■□□□□ 0.63
CNOT4O95628 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNOT4O95628 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CNOT4O95628 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CNOT4O95628 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNOT4O95628 AC092437.1-201ENST00000624794 1048 ntBASIC18.98■□□□□ 0.63
CNOT4O95628 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CNOT4O95628 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNOT4O95628 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.98■□□□□ 0.63
CNOT4O95628 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CNOT4O95628 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNOT4O95628 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNOT4O95628 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CNOT4O95628 AC127496.7-201ENST00000625110 1798 ntBASIC18.97■□□□□ 0.63
CNOT4O95628 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.97■□□□□ 0.63
CNOT4O95628 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNOT4O95628 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNOT4O95628 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.97■□□□□ 0.63
CNOT4O95628 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.97■□□□□ 0.63
CNOT4O95628 AC004911.1-201ENST00000416316 871 ntBASIC18.97■□□□□ 0.63
CNOT4O95628 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.97■□□□□ 0.63
CNOT4O95628 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.97■□□□□ 0.63
CNOT4O95628 AC005224.4-201ENST00000583262 1652 ntBASIC18.97■□□□□ 0.63
CNOT4O95628 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CNOT4O95628 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CNOT4O95628 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.97■□□□□ 0.63
CNOT4O95628 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CNOT4O95628 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNOT4O95628 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNOT4O95628 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
CNOT4O95628 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CNOT4O95628 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CNOT4O95628 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.96■□□□□ 0.63
CNOT4O95628 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNOT4O95628 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CNOT4O95628 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms