Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF253O75346 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
ZNF253O75346 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
ZNF253O75346 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
ZNF253O75346 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
ZNF253O75346 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
ZNF253O75346 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC16.63■□□□□ 0.25
ZNF253O75346 CLTA-206ENST00000466396 695 ntTSL 2 BASIC16.63■□□□□ 0.25
ZNF253O75346 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF253O75346 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF253O75346 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF253O75346 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF253O75346 AC138932.1-201ENST00000534164 6830 ntBASIC16.63■□□□□ 0.25
ZNF253O75346 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF253O75346 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC16.63■□□□□ 0.25
ZNF253O75346 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.63■□□□□ 0.25
ZNF253O75346 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF253O75346 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF253O75346 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC16.62■□□□□ 0.25
ZNF253O75346 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF253O75346 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ZNF253O75346 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC16.62■□□□□ 0.25
ZNF253O75346 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC16.62■□□□□ 0.25
ZNF253O75346 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
ZNF253O75346 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC16.62■□□□□ 0.25
ZNF253O75346 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC16.62■□□□□ 0.25
ZNF253O75346 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
ZNF253O75346 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF253O75346 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF253O75346 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF253O75346 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC16.62■□□□□ 0.25
ZNF253O75346 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF253O75346 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC16.62■□□□□ 0.25
ZNF253O75346 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF253O75346 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC16.61■□□□□ 0.25
ZNF253O75346 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF253O75346 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF253O75346 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC16.61■□□□□ 0.25
ZNF253O75346 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF253O75346 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF253O75346 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF253O75346 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF253O75346 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF253O75346 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF253O75346 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC16.61■□□□□ 0.25
ZNF253O75346 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
ZNF253O75346 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF253O75346 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC16.61■□□□□ 0.25
ZNF253O75346 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC16.61■□□□□ 0.25
ZNF253O75346 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF253O75346 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
ZNF253O75346 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF253O75346 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
ZNF253O75346 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
ZNF253O75346 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF253O75346 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC16.61■□□□□ 0.25
ZNF253O75346 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF253O75346 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF253O75346 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC16.61■□□□□ 0.25
ZNF253O75346 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF253O75346 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
ZNF253O75346 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF253O75346 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF253O75346 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF253O75346 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
ZNF253O75346 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF253O75346 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF253O75346 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF253O75346 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF253O75346 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF253O75346 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF253O75346 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF253O75346 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF253O75346 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF253O75346 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC16.6■□□□□ 0.25
ZNF253O75346 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF253O75346 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC16.6■□□□□ 0.25
ZNF253O75346 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF253O75346 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
ZNF253O75346 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF253O75346 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF253O75346 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF253O75346 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
ZNF253O75346 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC16.59■□□□□ 0.25
ZNF253O75346 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC16.59■□□□□ 0.25
ZNF253O75346 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC16.59■□□□□ 0.25
ZNF253O75346 AC092028.1-203ENST00000608262 953 ntBASIC16.59■□□□□ 0.25
ZNF253O75346 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC16.59■□□□□ 0.25
ZNF253O75346 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
ZNF253O75346 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF253O75346 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC16.59■□□□□ 0.25
ZNF253O75346 AC009102.2-201ENST00000606772 1639 ntBASIC16.59■□□□□ 0.25
ZNF253O75346 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
ZNF253O75346 AL391422.3-201ENST00000603791 2761 ntBASIC16.59■□□□□ 0.25
ZNF253O75346 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC16.59■□□□□ 0.25
ZNF253O75346 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
ZNF253O75346 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
ZNF253O75346 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ZNF253O75346 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF253O75346 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms