Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 AC079140.4-201ENST00000507448 529 ntBASIC20.55■□□□□ 0.88
CPNE3O75131 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.55■□□□□ 0.88
CPNE3O75131 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.55■□□□□ 0.88
CPNE3O75131 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPNE3O75131 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPNE3O75131 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPNE3O75131 LINC01960-201ENST00000563759 1884 ntBASIC20.54■□□□□ 0.88
CPNE3O75131 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.54■□□□□ 0.88
CPNE3O75131 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.54■□□□□ 0.88
CPNE3O75131 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.54■□□□□ 0.88
CPNE3O75131 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.54■□□□□ 0.88
CPNE3O75131 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPNE3O75131 KRT19P1-201ENST00000405746 1186 ntBASIC20.54■□□□□ 0.88
CPNE3O75131 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.54■□□□□ 0.88
CPNE3O75131 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.54■□□□□ 0.88
CPNE3O75131 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CPNE3O75131 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CPNE3O75131 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CPNE3O75131 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CPNE3O75131 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.54■□□□□ 0.88
CPNE3O75131 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPNE3O75131 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
CPNE3O75131 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CPNE3O75131 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPNE3O75131 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CPNE3O75131 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.53■□□□□ 0.88
CPNE3O75131 AC006015.1-201ENST00000429970 570 ntBASIC20.53■□□□□ 0.88
CPNE3O75131 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CPNE3O75131 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.53■□□□□ 0.88
CPNE3O75131 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CPNE3O75131 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPNE3O75131 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPNE3O75131 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.53■□□□□ 0.88
CPNE3O75131 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPNE3O75131 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CPNE3O75131 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPNE3O75131 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPNE3O75131 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CPNE3O75131 AC009237.3-201ENST00000393279 1427 ntBASIC20.53■□□□□ 0.88
CPNE3O75131 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CPNE3O75131 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CPNE3O75131 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CPNE3O75131 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CPNE3O75131 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.52■□□□□ 0.88
CPNE3O75131 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CPNE3O75131 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.52■□□□□ 0.88
CPNE3O75131 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
CPNE3O75131 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.51■□□□□ 0.87
CPNE3O75131 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPNE3O75131 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.51■□□□□ 0.87
CPNE3O75131 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.51■□□□□ 0.87
CPNE3O75131 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.51■□□□□ 0.87
CPNE3O75131 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.51■□□□□ 0.87
CPNE3O75131 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPNE3O75131 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CPNE3O75131 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPNE3O75131 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
CPNE3O75131 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.51■□□□□ 0.87
CPNE3O75131 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPNE3O75131 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPNE3O75131 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CPNE3O75131 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CPNE3O75131 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CPNE3O75131 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.5■□□□□ 0.87
CPNE3O75131 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
CPNE3O75131 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.5■□□□□ 0.87
CPNE3O75131 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.5■□□□□ 0.87
CPNE3O75131 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CPNE3O75131 AC005224.4-201ENST00000583262 1652 ntBASIC20.5■□□□□ 0.87
CPNE3O75131 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPNE3O75131 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPNE3O75131 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CPNE3O75131 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPNE3O75131 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.5■□□□□ 0.87
CPNE3O75131 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
CPNE3O75131 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.5■□□□□ 0.87
CPNE3O75131 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPNE3O75131 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPNE3O75131 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
CPNE3O75131 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.49■□□□□ 0.87
CPNE3O75131 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.49■□□□□ 0.87
CPNE3O75131 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.49■□□□□ 0.87
CPNE3O75131 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.49■□□□□ 0.87
CPNE3O75131 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.49■□□□□ 0.87
CPNE3O75131 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPNE3O75131 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPNE3O75131 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPNE3O75131 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CPNE3O75131 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.49■□□□□ 0.87
CPNE3O75131 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE3O75131 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE3O75131 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE3O75131 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE3O75131 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE3O75131 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE3O75131 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE3O75131 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE3O75131 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
CPNE3O75131 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE3O75131 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms