Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 AF201337.1-201ENST00000520239 748 ntBASIC27.74■■■□□ 2.03
PTCD1O75127 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
PTCD1O75127 AC105036.2-201ENST00000569468 176 ntBASIC27.74■■■□□ 2.03
PTCD1O75127 MIR4651-201ENST00000582622 73 ntBASIC27.74■■■□□ 2.03
PTCD1O75127 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC27.74■■■□□ 2.03
PTCD1O75127 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC27.74■■■□□ 2.03
PTCD1O75127 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
PTCD1O75127 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
PTCD1O75127 AC098934.4-201ENST00000564127 592 ntBASIC27.73■■■□□ 2.03
PTCD1O75127 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC27.73■■■□□ 2.03
PTCD1O75127 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC27.73■■■□□ 2.03
PTCD1O75127 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
PTCD1O75127 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
PTCD1O75127 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
PTCD1O75127 LINC00526-201ENST00000581067 1875 ntBASIC27.72■■■□□ 2.03
PTCD1O75127 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
PTCD1O75127 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
PTCD1O75127 APTR-203ENST00000430801 583 ntTSL 5 BASIC27.72■■■□□ 2.03
PTCD1O75127 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC27.72■■■□□ 2.03
PTCD1O75127 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC27.72■■■□□ 2.03
PTCD1O75127 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC27.72■■■□□ 2.03
PTCD1O75127 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
PTCD1O75127 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
PTCD1O75127 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC27.71■■■□□ 2.03
PTCD1O75127 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
PTCD1O75127 AC069152.1-201ENST00000438030 544 ntBASIC27.71■■■□□ 2.03
PTCD1O75127 OR7E47P-201ENST00000546390 1422 ntBASIC27.71■■■□□ 2.03
PTCD1O75127 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC27.71■■■□□ 2.03
PTCD1O75127 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
PTCD1O75127 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
PTCD1O75127 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
PTCD1O75127 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
PTCD1O75127 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
PTCD1O75127 FXN-202ENST00000396364 980 ntTSL 5 BASIC27.7■■■□□ 2.02
PTCD1O75127 UQCRFS1P1-201ENST00000435169 820 ntBASIC27.7■■■□□ 2.02
PTCD1O75127 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC27.7■■■□□ 2.02
PTCD1O75127 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
PTCD1O75127 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC27.7■■■□□ 2.02
PTCD1O75127 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC27.7■■■□□ 2.02
PTCD1O75127 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
PTCD1O75127 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
PTCD1O75127 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC27.7■■■□□ 2.02
PTCD1O75127 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC27.7■■■□□ 2.02
PTCD1O75127 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
PTCD1O75127 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
PTCD1O75127 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
PTCD1O75127 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
PTCD1O75127 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
PTCD1O75127 KRT18P20-201ENST00000548986 1279 ntBASIC27.69■■■□□ 2.02
PTCD1O75127 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC27.69■■■□□ 2.02
PTCD1O75127 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC27.69■■■□□ 2.02
PTCD1O75127 AC133552.2-202ENST00000575694 574 ntBASIC27.69■■■□□ 2.02
PTCD1O75127 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
PTCD1O75127 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC27.69■■■□□ 2.02
PTCD1O75127 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC27.69■■■□□ 2.02
PTCD1O75127 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
PTCD1O75127 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC27.69■■■□□ 2.02
PTCD1O75127 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC27.69■■■□□ 2.02
PTCD1O75127 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
PTCD1O75127 BMP1-204ENST00000397814 836 ntTSL 4 BASIC27.68■■■□□ 2.02
PTCD1O75127 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
PTCD1O75127 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
PTCD1O75127 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC27.68■■■□□ 2.02
PTCD1O75127 RGMA-211ENST00000557420 989 ntTSL 3 BASIC27.68■■■□□ 2.02
PTCD1O75127 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC27.68■■■□□ 2.02
PTCD1O75127 AC066615.1-201ENST00000640911 628 ntBASIC27.68■■■□□ 2.02
PTCD1O75127 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
PTCD1O75127 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC27.68■■■□□ 2.02
PTCD1O75127 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC27.68■■■□□ 2.02
PTCD1O75127 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC27.68■■■□□ 2.02
PTCD1O75127 NAA20-201ENST00000310450 920 ntTSL 2 BASIC27.67■■■□□ 2.02
PTCD1O75127 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
PTCD1O75127 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC27.67■■■□□ 2.02
PTCD1O75127 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC27.67■■■□□ 2.02
PTCD1O75127 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC27.67■■■□□ 2.02
PTCD1O75127 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
PTCD1O75127 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
PTCD1O75127 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC27.67■■■□□ 2.02
PTCD1O75127 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
PTCD1O75127 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
PTCD1O75127 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
PTCD1O75127 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
PTCD1O75127 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC27.66■■■□□ 2.02
PTCD1O75127 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
PTCD1O75127 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC27.66■■■□□ 2.02
PTCD1O75127 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
PTCD1O75127 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC27.66■■■□□ 2.02
PTCD1O75127 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC27.66■■■□□ 2.02
PTCD1O75127 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC27.66■■■□□ 2.02
PTCD1O75127 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
PTCD1O75127 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC27.65■■■□□ 2.02
PTCD1O75127 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
PTCD1O75127 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
PTCD1O75127 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.02
PTCD1O75127 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
PTCD1O75127 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC27.64■■■□□ 2.02
PTCD1O75127 AC133041.1-202ENST00000642053 222 ntBASIC27.64■■■□□ 2.02
PTCD1O75127 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC27.64■■■□□ 2.02
PTCD1O75127 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC27.64■■■□□ 2.02
PTCD1O75127 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC27.64■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms