Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SHOX2O60902 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.58■■□□□ 1.04
SHOX2O60902 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHOX2O60902 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHOX2O60902 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
SHOX2O60902 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.57■■□□□ 1.04
SHOX2O60902 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHOX2O60902 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
SHOX2O60902 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHOX2O60902 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHOX2O60902 AL049796.1-201ENST00000565336 1766 ntBASIC21.57■■□□□ 1.04
SHOX2O60902 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
SHOX2O60902 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.57■■□□□ 1.04
SHOX2O60902 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.57■■□□□ 1.04
SHOX2O60902 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
SHOX2O60902 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHOX2O60902 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHOX2O60902 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHOX2O60902 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHOX2O60902 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.56■■□□□ 1.04
SHOX2O60902 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
SHOX2O60902 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHOX2O60902 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SHOX2O60902 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.56■■□□□ 1.04
SHOX2O60902 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.56■■□□□ 1.04
SHOX2O60902 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHOX2O60902 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHOX2O60902 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SHOX2O60902 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
SHOX2O60902 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHOX2O60902 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
SHOX2O60902 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SHOX2O60902 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.56■■□□□ 1.04
SHOX2O60902 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.56■■□□□ 1.04
SHOX2O60902 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SHOX2O60902 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.56■■□□□ 1.04
SHOX2O60902 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.55■■□□□ 1.04
SHOX2O60902 SMG8-203ENST00000578922 2178 ntBASIC21.55■■□□□ 1.04
SHOX2O60902 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SHOX2O60902 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SHOX2O60902 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.55■■□□□ 1.04
SHOX2O60902 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SHOX2O60902 PCDHAC2-203ENST00000615316 3011 ntBASIC21.55■■□□□ 1.04
SHOX2O60902 GPX1-201ENST00000419349 1106 ntBASIC21.55■■□□□ 1.04
SHOX2O60902 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.55■■□□□ 1.04
SHOX2O60902 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.55■■□□□ 1.04
SHOX2O60902 AC011551.1-201ENST00000614101 683 ntBASIC21.55■■□□□ 1.04
SHOX2O60902 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.55■■□□□ 1.04
SHOX2O60902 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
SHOX2O60902 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.55■■□□□ 1.04
SHOX2O60902 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SHOX2O60902 BX323043.1-201ENST00000641006 1765 ntBASIC21.55■■□□□ 1.04
SHOX2O60902 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
SHOX2O60902 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SHOX2O60902 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
SHOX2O60902 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.55■■□□□ 1.04
SHOX2O60902 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
SHOX2O60902 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SHOX2O60902 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
SHOX2O60902 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.54■■□□□ 1.04
SHOX2O60902 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
SHOX2O60902 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SHOX2O60902 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.54■■□□□ 1.04
SHOX2O60902 AC018445.3-201ENST00000624177 1945 ntBASIC21.54■■□□□ 1.04
SHOX2O60902 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
SHOX2O60902 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SHOX2O60902 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SHOX2O60902 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
SHOX2O60902 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SHOX2O60902 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SHOX2O60902 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SHOX2O60902 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
SHOX2O60902 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SHOX2O60902 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SHOX2O60902 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
SHOX2O60902 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SHOX2O60902 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
SHOX2O60902 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.53■■□□□ 1.04
SHOX2O60902 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHOX2O60902 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHOX2O60902 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHOX2O60902 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.53■■□□□ 1.04
SHOX2O60902 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
SHOX2O60902 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.53■■□□□ 1.04
SHOX2O60902 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.53■■□□□ 1.04
SHOX2O60902 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHOX2O60902 AC026471.6-201ENST00000622954 1905 ntBASIC21.53■■□□□ 1.04
SHOX2O60902 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHOX2O60902 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
SHOX2O60902 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SHOX2O60902 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SHOX2O60902 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SHOX2O60902 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SHOX2O60902 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
SHOX2O60902 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SHOX2O60902 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SHOX2O60902 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
SHOX2O60902 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
SHOX2O60902 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SHOX2O60902 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms