Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 FAM99A-202ENST00000538190 1989 ntBASIC21.85■■□□□ 1.09
PRAMEF11O60813 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PRAMEF11O60813 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PRAMEF11O60813 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
PRAMEF11O60813 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PRAMEF11O60813 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PRAMEF11O60813 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PRAMEF11O60813 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PRAMEF11O60813 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PRAMEF11O60813 AC026271.2-201ENST00000428091 497 ntBASIC21.85■■□□□ 1.09
PRAMEF11O60813 AC097381.1-201ENST00000429019 1296 ntBASIC21.85■■□□□ 1.09
PRAMEF11O60813 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.85■■□□□ 1.09
PRAMEF11O60813 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
PRAMEF11O60813 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.85■■□□□ 1.09
PRAMEF11O60813 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.85■■□□□ 1.09
PRAMEF11O60813 MIR6821-201ENST00000617625 74 ntBASIC21.85■■□□□ 1.09
PRAMEF11O60813 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PRAMEF11O60813 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.85■■□□□ 1.09
PRAMEF11O60813 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
PRAMEF11O60813 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PRAMEF11O60813 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PRAMEF11O60813 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
PRAMEF11O60813 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
PRAMEF11O60813 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.85■■□□□ 1.09
PRAMEF11O60813 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PRAMEF11O60813 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PRAMEF11O60813 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PRAMEF11O60813 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
PRAMEF11O60813 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.84■■□□□ 1.09
PRAMEF11O60813 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.84■■□□□ 1.09
PRAMEF11O60813 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PRAMEF11O60813 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
PRAMEF11O60813 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PRAMEF11O60813 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.84■■□□□ 1.09
PRAMEF11O60813 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.84■■□□□ 1.09
PRAMEF11O60813 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PRAMEF11O60813 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
PRAMEF11O60813 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
PRAMEF11O60813 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
PRAMEF11O60813 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PRAMEF11O60813 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PRAMEF11O60813 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.83■■□□□ 1.09
PRAMEF11O60813 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.83■■□□□ 1.09
PRAMEF11O60813 C11orf96-202ENST00000528572 1834 ntBASIC21.83■■□□□ 1.09
PRAMEF11O60813 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.83■■□□□ 1.09
PRAMEF11O60813 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
PRAMEF11O60813 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
PRAMEF11O60813 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
PRAMEF11O60813 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PRAMEF11O60813 RARRES2P6-201ENST00000567333 442 ntBASIC21.83■■□□□ 1.09
PRAMEF11O60813 TERF1P2-201ENST00000583350 1212 ntBASIC21.83■■□□□ 1.09
PRAMEF11O60813 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PRAMEF11O60813 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PRAMEF11O60813 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PRAMEF11O60813 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PRAMEF11O60813 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PRAMEF11O60813 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PRAMEF11O60813 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PRAMEF11O60813 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PRAMEF11O60813 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PRAMEF11O60813 CCDC92B-201ENST00000575506 885 ntBASIC21.82■■□□□ 1.08
PRAMEF11O60813 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.82■■□□□ 1.08
PRAMEF11O60813 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
PRAMEF11O60813 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PRAMEF11O60813 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.82■■□□□ 1.08
PRAMEF11O60813 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PRAMEF11O60813 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.81■■□□□ 1.08
PRAMEF11O60813 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRAMEF11O60813 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRAMEF11O60813 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRAMEF11O60813 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
PRAMEF11O60813 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
PRAMEF11O60813 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.81■■□□□ 1.08
PRAMEF11O60813 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.81■■□□□ 1.08
PRAMEF11O60813 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.81■■□□□ 1.08
PRAMEF11O60813 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.81■■□□□ 1.08
PRAMEF11O60813 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PRAMEF11O60813 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
PRAMEF11O60813 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRAMEF11O60813 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRAMEF11O60813 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PRAMEF11O60813 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.8■■□□□ 1.08
PRAMEF11O60813 MIR935-201ENST00000401179 91 ntBASIC21.8■■□□□ 1.08
PRAMEF11O60813 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.8■■□□□ 1.08
PRAMEF11O60813 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.8■■□□□ 1.08
PRAMEF11O60813 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.8■■□□□ 1.08
PRAMEF11O60813 AC087623.3-201ENST00000607047 1098 ntBASIC21.8■■□□□ 1.08
PRAMEF11O60813 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PRAMEF11O60813 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRAMEF11O60813 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
PRAMEF11O60813 AC026471.6-201ENST00000622954 1905 ntBASIC21.8■■□□□ 1.08
PRAMEF11O60813 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRAMEF11O60813 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.8■■□□□ 1.08
PRAMEF11O60813 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRAMEF11O60813 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PRAMEF11O60813 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
PRAMEF11O60813 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.79■■□□□ 1.08
PRAMEF11O60813 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
PRAMEF11O60813 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRAMEF11O60813 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms