Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
GFRA3O60609 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
GFRA3O60609 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
GFRA3O60609 AL049597.2-201ENST00000565575 961 ntBASIC21.23■□□□□ 0.99
GFRA3O60609 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
GFRA3O60609 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.23■□□□□ 0.99
GFRA3O60609 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.23■□□□□ 0.99
GFRA3O60609 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.23■□□□□ 0.99
GFRA3O60609 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
GFRA3O60609 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GFRA3O60609 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GFRA3O60609 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
GFRA3O60609 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GFRA3O60609 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GFRA3O60609 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GFRA3O60609 AC012618.2-201ENST00000428058 849 ntBASIC21.22■□□□□ 0.99
GFRA3O60609 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.22■□□□□ 0.99
GFRA3O60609 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.22■□□□□ 0.99
GFRA3O60609 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
GFRA3O60609 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.22■□□□□ 0.99
GFRA3O60609 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.22■□□□□ 0.99
GFRA3O60609 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
GFRA3O60609 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GFRA3O60609 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GFRA3O60609 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
GFRA3O60609 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
GFRA3O60609 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GFRA3O60609 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GFRA3O60609 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
GFRA3O60609 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.21■□□□□ 0.99
GFRA3O60609 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.21■□□□□ 0.99
GFRA3O60609 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
GFRA3O60609 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.2■□□□□ 0.99
GFRA3O60609 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
GFRA3O60609 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
GFRA3O60609 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
GFRA3O60609 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
GFRA3O60609 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.2■□□□□ 0.98
GFRA3O60609 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.2■□□□□ 0.98
GFRA3O60609 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.2■□□□□ 0.98
GFRA3O60609 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
GFRA3O60609 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
GFRA3O60609 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.19■□□□□ 0.98
GFRA3O60609 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.19■□□□□ 0.98
GFRA3O60609 AC004687.1-201ENST00000579003 1625 ntBASIC21.19■□□□□ 0.98
GFRA3O60609 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
GFRA3O60609 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.19■□□□□ 0.98
GFRA3O60609 AC233702.5-201ENST00000584107 538 ntBASIC21.19■□□□□ 0.98
GFRA3O60609 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
GFRA3O60609 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
GFRA3O60609 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.19■□□□□ 0.98
GFRA3O60609 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.18■□□□□ 0.98
GFRA3O60609 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
GFRA3O60609 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
GFRA3O60609 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
GFRA3O60609 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.18■□□□□ 0.98
GFRA3O60609 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.18■□□□□ 0.98
GFRA3O60609 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.18■□□□□ 0.98
GFRA3O60609 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GFRA3O60609 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
GFRA3O60609 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.18■□□□□ 0.98
GFRA3O60609 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
GFRA3O60609 POU5F1P4-201ENST00000413175 1085 ntBASIC21.17■□□□□ 0.98
GFRA3O60609 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.17■□□□□ 0.98
GFRA3O60609 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.17■□□□□ 0.98
GFRA3O60609 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
GFRA3O60609 AC060766.5-201ENST00000590539 871 ntBASIC21.17■□□□□ 0.98
GFRA3O60609 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GFRA3O60609 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GFRA3O60609 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.16■□□□□ 0.98
GFRA3O60609 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
GFRA3O60609 RPS2P55-201ENST00000397318 883 ntBASIC21.16■□□□□ 0.98
GFRA3O60609 LSM12P1-201ENST00000411836 588 ntBASIC21.16■□□□□ 0.98
GFRA3O60609 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.16■□□□□ 0.98
GFRA3O60609 AC107956.1-201ENST00000494359 873 ntBASIC21.16■□□□□ 0.98
GFRA3O60609 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.16■□□□□ 0.98
GFRA3O60609 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.16■□□□□ 0.98
GFRA3O60609 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.16■□□□□ 0.98
GFRA3O60609 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.16■□□□□ 0.98
GFRA3O60609 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.16■□□□□ 0.98
GFRA3O60609 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
GFRA3O60609 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
GFRA3O60609 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GFRA3O60609 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
GFRA3O60609 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
GFRA3O60609 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.15■□□□□ 0.98
GFRA3O60609 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
GFRA3O60609 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
GFRA3O60609 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.15■□□□□ 0.98
GFRA3O60609 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
GFRA3O60609 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC21.15■□□□□ 0.98
GFRA3O60609 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
GFRA3O60609 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.15■□□□□ 0.98
GFRA3O60609 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
GFRA3O60609 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
GFRA3O60609 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
GFRA3O60609 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GFRA3O60609 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GFRA3O60609 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.15■□□□□ 0.98
GFRA3O60609 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms