Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGA12O60330 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGA12O60330 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGA12O60330 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGA12O60330 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHGA12O60330 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHGA12O60330 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.28■■□□□ 1
PCDHGA12O60330 AC142086.2-201ENST00000569753 217 ntBASIC21.28■■□□□ 1
PCDHGA12O60330 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
PCDHGA12O60330 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.28■■□□□ 1
PCDHGA12O60330 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHGA12O60330 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.28■■□□□ 1
PCDHGA12O60330 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
PCDHGA12O60330 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGA12O60330 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGA12O60330 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGA12O60330 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHGA12O60330 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHGA12O60330 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHGA12O60330 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHGA12O60330 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.27■■□□□ 1
PCDHGA12O60330 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.27■■□□□ 1
PCDHGA12O60330 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.27■■□□□ 1
PCDHGA12O60330 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.27■■□□□ 1
PCDHGA12O60330 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHGA12O60330 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
PCDHGA12O60330 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.27■■□□□ 1
PCDHGA12O60330 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PCDHGA12O60330 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
PCDHGA12O60330 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
PCDHGA12O60330 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGA12O60330 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGA12O60330 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGA12O60330 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.26■□□□□ 0.99
PCDHGA12O60330 AC231657.2-201ENST00000624556 255 ntBASIC21.26■□□□□ 0.99
PCDHGA12O60330 TMEM191A-211ENST00000637163 1067 ntBASIC21.26■□□□□ 0.99
PCDHGA12O60330 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGA12O60330 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGA12O60330 KRT87P-202ENST00000534226 1464 ntBASIC21.26■□□□□ 0.99
PCDHGA12O60330 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
PCDHGA12O60330 AC005224.4-201ENST00000583262 1652 ntBASIC21.25■□□□□ 0.99
PCDHGA12O60330 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGA12O60330 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
PCDHGA12O60330 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGA12O60330 AC009237.3-201ENST00000393279 1427 ntBASIC21.25■□□□□ 0.99
PCDHGA12O60330 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
PCDHGA12O60330 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
PCDHGA12O60330 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGA12O60330 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.25■□□□□ 0.99
PCDHGA12O60330 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.25■□□□□ 0.99
PCDHGA12O60330 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
PCDHGA12O60330 AL121832.2-201ENST00000610979 668 ntBASIC21.25■□□□□ 0.99
PCDHGA12O60330 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.25■□□□□ 0.99
PCDHGA12O60330 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
PCDHGA12O60330 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGA12O60330 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGA12O60330 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
PCDHGA12O60330 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.24■□□□□ 0.99
PCDHGA12O60330 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGA12O60330 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGA12O60330 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.24■□□□□ 0.99
PCDHGA12O60330 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGA12O60330 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.24■□□□□ 0.99
PCDHGA12O60330 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
PCDHGA12O60330 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGA12O60330 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.24■□□□□ 0.99
PCDHGA12O60330 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.24■□□□□ 0.99
PCDHGA12O60330 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
PCDHGA12O60330 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGA12O60330 CD99P1-205ENST00000527459 561 ntBASIC21.24■□□□□ 0.99
PCDHGA12O60330 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGA12O60330 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.24■□□□□ 0.99
PCDHGA12O60330 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
PCDHGA12O60330 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGA12O60330 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGA12O60330 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.23■□□□□ 0.99
PCDHGA12O60330 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGA12O60330 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
PCDHGA12O60330 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGA12O60330 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
PCDHGA12O60330 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGA12O60330 AC104187.1-201ENST00000607510 612 ntBASIC21.23■□□□□ 0.99
PCDHGA12O60330 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.23■□□□□ 0.99
PCDHGA12O60330 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGA12O60330 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
PCDHGA12O60330 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGA12O60330 AL117328.2-201ENST00000624617 1940 ntBASIC21.23■□□□□ 0.99
PCDHGA12O60330 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.23■□□□□ 0.99
PCDHGA12O60330 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGA12O60330 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGA12O60330 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGA12O60330 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGA12O60330 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGA12O60330 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGA12O60330 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGA12O60330 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.22■□□□□ 0.99
PCDHGA12O60330 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGA12O60330 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.21■□□□□ 0.99
PCDHGA12O60330 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGA12O60330 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms