Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SLC28A2O43868 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.61■□□□□ 0.89
SLC28A2O43868 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.61■□□□□ 0.89
SLC28A2O43868 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.61■□□□□ 0.89
SLC28A2O43868 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.61■□□□□ 0.89
SLC28A2O43868 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.61■□□□□ 0.89
SLC28A2O43868 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.61■□□□□ 0.89
SLC28A2O43868 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SLC28A2O43868 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.61■□□□□ 0.89
SLC28A2O43868 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SLC28A2O43868 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC28A2O43868 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.61■□□□□ 0.89
SLC28A2O43868 LINC00565-201ENST00000562710 2331 ntBASIC20.61■□□□□ 0.89
SLC28A2O43868 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC28A2O43868 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
SLC28A2O43868 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC28A2O43868 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC28A2O43868 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SLC28A2O43868 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SLC28A2O43868 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC28A2O43868 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC28A2O43868 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.6■□□□□ 0.89
SLC28A2O43868 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC28A2O43868 CLDN5-201ENST00000403084 2357 ntBASIC20.6■□□□□ 0.89
SLC28A2O43868 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC28A2O43868 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC28A2O43868 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SLC28A2O43868 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC28A2O43868 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC28A2O43868 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC28A2O43868 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.59■□□□□ 0.89
SLC28A2O43868 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC28A2O43868 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC28A2O43868 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLC28A2O43868 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.59■□□□□ 0.89
SLC28A2O43868 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.59■□□□□ 0.89
SLC28A2O43868 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLC28A2O43868 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC28A2O43868 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC28A2O43868 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.59■□□□□ 0.89
SLC28A2O43868 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC28A2O43868 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.59■□□□□ 0.89
SLC28A2O43868 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC28A2O43868 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC28A2O43868 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC28A2O43868 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC28A2O43868 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SLC28A2O43868 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC28A2O43868 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLC28A2O43868 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC28A2O43868 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
SLC28A2O43868 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC28A2O43868 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC28A2O43868 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SLC28A2O43868 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.58■□□□□ 0.89
SLC28A2O43868 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.58■□□□□ 0.89
SLC28A2O43868 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.58■□□□□ 0.88
SLC28A2O43868 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC28A2O43868 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC28A2O43868 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC28A2O43868 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SLC28A2O43868 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC28A2O43868 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC28A2O43868 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC28A2O43868 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC28A2O43868 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC28A2O43868 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC28A2O43868 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.57■□□□□ 0.88
SLC28A2O43868 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.57■□□□□ 0.88
SLC28A2O43868 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC28A2O43868 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC28A2O43868 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SLC28A2O43868 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.57■□□□□ 0.88
SLC28A2O43868 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.57■□□□□ 0.88
SLC28A2O43868 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.57■□□□□ 0.88
SLC28A2O43868 DUX4L4-201ENST00000566884 1269 ntBASIC20.57■□□□□ 0.88
SLC28A2O43868 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC28A2O43868 AL499627.2-201ENST00000606283 725 ntBASIC20.57■□□□□ 0.88
SLC28A2O43868 pRNA.6-201ENST00000610482 90 ntBASIC20.57■□□□□ 0.88
SLC28A2O43868 pRNA.5-201ENST00000612139 90 ntBASIC20.57■□□□□ 0.88
SLC28A2O43868 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC28A2O43868 pRNA.11-201ENST00000618423 90 ntBASIC20.57■□□□□ 0.88
SLC28A2O43868 pRNA.13-201ENST00000619112 90 ntBASIC20.57■□□□□ 0.88
SLC28A2O43868 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC28A2O43868 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SLC28A2O43868 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC28A2O43868 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC28A2O43868 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SLC28A2O43868 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC28A2O43868 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC28A2O43868 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.56■□□□□ 0.88
SLC28A2O43868 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC28A2O43868 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC28A2O43868 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC28A2O43868 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC28A2O43868 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC28A2O43868 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC28A2O43868 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC28A2O43868 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC28A2O43868 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms