Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
SGCEO43556 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SGCEO43556 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SGCEO43556 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
SGCEO43556 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.92■□□□□ 0.62
SGCEO43556 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SGCEO43556 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SGCEO43556 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SGCEO43556 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SGCEO43556 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SGCEO43556 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SGCEO43556 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.91■□□□□ 0.62
SGCEO43556 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.91■□□□□ 0.62
SGCEO43556 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SGCEO43556 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.91■□□□□ 0.62
SGCEO43556 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SGCEO43556 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SGCEO43556 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SGCEO43556 AC110285.6-201ENST00000617652 491 ntBASIC18.91■□□□□ 0.62
SGCEO43556 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SGCEO43556 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SGCEO43556 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SGCEO43556 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.91■□□□□ 0.62
SGCEO43556 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SGCEO43556 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SGCEO43556 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SGCEO43556 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SGCEO43556 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SGCEO43556 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SGCEO43556 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SGCEO43556 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SGCEO43556 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SGCEO43556 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
SGCEO43556 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.9■□□□□ 0.62
SGCEO43556 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.9■□□□□ 0.62
SGCEO43556 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SGCEO43556 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.9■□□□□ 0.62
SGCEO43556 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
SGCEO43556 AC126544.1-201ENST00000580842 1059 ntBASIC18.9■□□□□ 0.62
SGCEO43556 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.9■□□□□ 0.62
SGCEO43556 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.9■□□□□ 0.62
SGCEO43556 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SGCEO43556 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.9■□□□□ 0.62
SGCEO43556 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SGCEO43556 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
SGCEO43556 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SGCEO43556 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SGCEO43556 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SGCEO43556 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SGCEO43556 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
SGCEO43556 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SGCEO43556 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SGCEO43556 EDA-201ENST00000338901 1233 ntBASIC18.89■□□□□ 0.61
SGCEO43556 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.89■□□□□ 0.61
SGCEO43556 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.89■□□□□ 0.61
SGCEO43556 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SGCEO43556 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.89■□□□□ 0.61
SGCEO43556 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SGCEO43556 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.89■□□□□ 0.61
SGCEO43556 AC008764.7-201ENST00000593779 1081 ntBASIC18.89■□□□□ 0.61
SGCEO43556 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.89■□□□□ 0.61
SGCEO43556 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SGCEO43556 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SGCEO43556 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SGCEO43556 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SGCEO43556 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
SGCEO43556 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SGCEO43556 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.89■□□□□ 0.61
SGCEO43556 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SGCEO43556 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SGCEO43556 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SGCEO43556 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SGCEO43556 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SGCEO43556 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.88■□□□□ 0.61
SGCEO43556 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SGCEO43556 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SGCEO43556 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
SGCEO43556 AC027682.1-201ENST00000562846 899 ntBASIC18.88■□□□□ 0.61
SGCEO43556 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.88■□□□□ 0.61
SGCEO43556 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.88■□□□□ 0.61
SGCEO43556 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SGCEO43556 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.88■□□□□ 0.61
SGCEO43556 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.88■□□□□ 0.61
SGCEO43556 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SGCEO43556 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SGCEO43556 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SGCEO43556 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SGCEO43556 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.88■□□□□ 0.61
SGCEO43556 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SGCEO43556 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SGCEO43556 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SGCEO43556 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SGCEO43556 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SGCEO43556 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SGCEO43556 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SGCEO43556 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SGCEO43556 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SGCEO43556 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SGCEO43556 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SGCEO43556 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms