Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HDAC3O15379 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HDAC3O15379 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HDAC3O15379 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HDAC3O15379 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
HDAC3O15379 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HDAC3O15379 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.88■□□□□ 0.93
HDAC3O15379 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.88■□□□□ 0.93
HDAC3O15379 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.88■□□□□ 0.93
HDAC3O15379 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.88■□□□□ 0.93
HDAC3O15379 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
HDAC3O15379 AL157384.1-201ENST00000445995 2473 ntBASIC20.88■□□□□ 0.93
HDAC3O15379 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
HDAC3O15379 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HDAC3O15379 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
HDAC3O15379 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HDAC3O15379 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HDAC3O15379 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
HDAC3O15379 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HDAC3O15379 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
HDAC3O15379 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.87■□□□□ 0.93
HDAC3O15379 AC010997.5-201ENST00000609182 354 ntBASIC20.87■□□□□ 0.93
HDAC3O15379 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
HDAC3O15379 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HDAC3O15379 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.87■□□□□ 0.93
HDAC3O15379 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HDAC3O15379 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HDAC3O15379 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
HDAC3O15379 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.87■□□□□ 0.93
HDAC3O15379 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HDAC3O15379 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
HDAC3O15379 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HDAC3O15379 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.86■□□□□ 0.93
HDAC3O15379 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.86■□□□□ 0.93
HDAC3O15379 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.86■□□□□ 0.93
HDAC3O15379 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.86■□□□□ 0.93
HDAC3O15379 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HDAC3O15379 LINC01521-201ENST00000504184 1943 ntBASIC20.86■□□□□ 0.93
HDAC3O15379 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.86■□□□□ 0.93
HDAC3O15379 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HDAC3O15379 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.86■□□□□ 0.93
HDAC3O15379 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HDAC3O15379 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HDAC3O15379 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HDAC3O15379 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.85■□□□□ 0.93
HDAC3O15379 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HDAC3O15379 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HDAC3O15379 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HDAC3O15379 MIR4787-201ENST00000607364 84 ntBASIC20.85■□□□□ 0.93
HDAC3O15379 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
HDAC3O15379 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HDAC3O15379 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HDAC3O15379 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.85■□□□□ 0.93
HDAC3O15379 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
HDAC3O15379 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
HDAC3O15379 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HDAC3O15379 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HDAC3O15379 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HDAC3O15379 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HDAC3O15379 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HDAC3O15379 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HDAC3O15379 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HDAC3O15379 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HDAC3O15379 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HDAC3O15379 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HDAC3O15379 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HDAC3O15379 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
HDAC3O15379 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
HDAC3O15379 AC241377.3-202ENST00000626088 1088 ntBASIC20.84■□□□□ 0.93
HDAC3O15379 AC241585.3-202ENST00000628937 1088 ntBASIC20.84■□□□□ 0.93
HDAC3O15379 AC245100.8-202ENST00000629247 1058 ntBASIC20.84■□□□□ 0.93
HDAC3O15379 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
HDAC3O15379 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HDAC3O15379 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.84■□□□□ 0.93
HDAC3O15379 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HDAC3O15379 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.84■□□□□ 0.93
HDAC3O15379 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.84■□□□□ 0.93
HDAC3O15379 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
HDAC3O15379 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.84■□□□□ 0.93
HDAC3O15379 AC133637.1-201ENST00000624115 1537 ntBASIC20.83■□□□□ 0.93
HDAC3O15379 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HDAC3O15379 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HDAC3O15379 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HDAC3O15379 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HDAC3O15379 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.83■□□□□ 0.93
HDAC3O15379 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HDAC3O15379 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.83■□□□□ 0.93
HDAC3O15379 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HDAC3O15379 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HDAC3O15379 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HDAC3O15379 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.83■□□□□ 0.93
HDAC3O15379 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.83■□□□□ 0.93
HDAC3O15379 AL451085.2-201ENST00000605085 799 ntBASIC20.83■□□□□ 0.93
HDAC3O15379 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
HDAC3O15379 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HDAC3O15379 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.82■□□□□ 0.92
HDAC3O15379 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.82■□□□□ 0.92
HDAC3O15379 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HDAC3O15379 AL117332.1-201ENST00000622628 974 ntBASIC20.82■□□□□ 0.92
HDAC3O15379 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms