Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SPTLC1O15269 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC23.04■■□□□ 1.28
SPTLC1O15269 AC079140.4-201ENST00000507448 529 ntBASIC23.04■■□□□ 1.28
SPTLC1O15269 GALNS-213ENST00000569433 723 ntTSL 3 BASIC23.04■■□□□ 1.28
SPTLC1O15269 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC23.04■■□□□ 1.28
SPTLC1O15269 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SPTLC1O15269 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SPTLC1O15269 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC23.04■■□□□ 1.28
SPTLC1O15269 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SPTLC1O15269 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SPTLC1O15269 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SPTLC1O15269 TERT-206ENST00000508104 2486 ntTSL 5 BASIC23.03■■□□□ 1.28
SPTLC1O15269 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
SPTLC1O15269 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC23.03■■□□□ 1.28
SPTLC1O15269 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SPTLC1O15269 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC23.03■■□□□ 1.28
SPTLC1O15269 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
SPTLC1O15269 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
SPTLC1O15269 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.03■■□□□ 1.28
SPTLC1O15269 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC23.03■■□□□ 1.28
SPTLC1O15269 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SPTLC1O15269 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.03■■□□□ 1.28
SPTLC1O15269 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SPTLC1O15269 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SPTLC1O15269 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SPTLC1O15269 ME3-201ENST00000323418 1068 ntTSL 5 BASIC23.02■■□□□ 1.28
SPTLC1O15269 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
SPTLC1O15269 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC23.02■■□□□ 1.28
SPTLC1O15269 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SPTLC1O15269 AC127496.7-201ENST00000625110 1798 ntBASIC23.01■■□□□ 1.27
SPTLC1O15269 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SPTLC1O15269 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SPTLC1O15269 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC23.01■■□□□ 1.27
SPTLC1O15269 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC23.01■■□□□ 1.27
SPTLC1O15269 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC23.01■■□□□ 1.27
SPTLC1O15269 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SPTLC1O15269 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SPTLC1O15269 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC23.01■■□□□ 1.27
SPTLC1O15269 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC23.01■■□□□ 1.27
SPTLC1O15269 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SPTLC1O15269 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SPTLC1O15269 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC23.01■■□□□ 1.27
SPTLC1O15269 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SPTLC1O15269 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
SPTLC1O15269 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.01■■□□□ 1.27
SPTLC1O15269 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SPTLC1O15269 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SPTLC1O15269 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC23.01■■□□□ 1.27
SPTLC1O15269 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC23■■□□□ 1.27
SPTLC1O15269 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC23■■□□□ 1.27
SPTLC1O15269 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SPTLC1O15269 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
SPTLC1O15269 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SPTLC1O15269 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SPTLC1O15269 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC23■■□□□ 1.27
SPTLC1O15269 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23■■□□□ 1.27
SPTLC1O15269 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SPTLC1O15269 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SPTLC1O15269 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC22.99■■□□□ 1.27
SPTLC1O15269 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
SPTLC1O15269 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.99■■□□□ 1.27
SPTLC1O15269 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
SPTLC1O15269 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC22.99■■□□□ 1.27
SPTLC1O15269 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC22.99■■□□□ 1.27
SPTLC1O15269 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC22.99■■□□□ 1.27
SPTLC1O15269 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SPTLC1O15269 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
SPTLC1O15269 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SPTLC1O15269 AC068473.5-201ENST00000616428 2072 ntBASIC22.98■■□□□ 1.27
SPTLC1O15269 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC22.98■■□□□ 1.27
SPTLC1O15269 VPS53-216ENST00000574029 585 ntTSL 4 BASIC22.98■■□□□ 1.27
SPTLC1O15269 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC22.98■■□□□ 1.27
SPTLC1O15269 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
SPTLC1O15269 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SPTLC1O15269 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SPTLC1O15269 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SPTLC1O15269 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SPTLC1O15269 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC22.97■■□□□ 1.27
SPTLC1O15269 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC22.97■■□□□ 1.27
SPTLC1O15269 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.97■■□□□ 1.27
SPTLC1O15269 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.97■■□□□ 1.27
SPTLC1O15269 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SPTLC1O15269 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SPTLC1O15269 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
SPTLC1O15269 AP006587.3-201ENST00000525742 1516 ntBASIC22.97■■□□□ 1.27
SPTLC1O15269 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SPTLC1O15269 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SPTLC1O15269 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC22.96■■□□□ 1.27
SPTLC1O15269 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
SPTLC1O15269 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
SPTLC1O15269 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SPTLC1O15269 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SPTLC1O15269 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SPTLC1O15269 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC22.96■■□□□ 1.27
SPTLC1O15269 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SPTLC1O15269 STX7-201ENST00000367937 1090 ntTSL 5 BASIC22.96■■□□□ 1.27
SPTLC1O15269 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.96■■□□□ 1.27
SPTLC1O15269 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC22.96■■□□□ 1.27
SPTLC1O15269 AL034346.1-201ENST00000568244 1277 ntBASIC22.96■■□□□ 1.27
SPTLC1O15269 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC22.96■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms