Protein–RNA interactions for Protein: O13527

TY1B-A, Truncated transposon Ty1-A Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-AO13527 YOR314WYOR314W 330 nt3.87□□□□□ -1.79
TY1B-AO13527 FDH2YPL275W 711 nt3.87□□□□□ -1.79
TY1B-AO13527 YBR137WYBR137W 540 nt3.87□□□□□ -1.79
TY1B-AO13527 YAK1YJL141C 2424 nt3.87□□□□□ -1.79
TY1B-AO13527 YFL040WYFL040W 1623 nt3.87□□□□□ -1.79
TY1B-AO13527 VPS30YPL120W 1674 nt3.87□□□□□ -1.79
TY1B-AO13527 YIG1YPL201C 1386 nt3.87□□□□□ -1.79
TY1B-AO13527 TRE2YOR256C 2430 nt3.86□□□□□ -1.79
TY1B-AO13527 STP1YDR463W 1560 nt3.86□□□□□ -1.79
TY1B-AO13527 APN2YBL019W 1563 nt3.86□□□□□ -1.79
TY1B-AO13527 tC(GCA)BtC(GCA)B 72 nt3.86□□□□□ -1.79
TY1B-AO13527 tC(GCA)GtC(GCA)G 72 nt3.86□□□□□ -1.79
TY1B-AO13527 tC(GCA)P1tC(GCA)P1 72 nt3.86□□□□□ -1.79
TY1B-AO13527 tC(GCA)P2tC(GCA)P2 72 nt3.86□□□□□ -1.79
TY1B-AO13527 YGL041W-AYGL041W-A 465 nt3.86□□□□□ -1.79
TY1B-AO13527 SIL1YOL031C 1266 nt3.86□□□□□ -1.79
TY1B-AO13527 SSP2YOR242C 1116 nt3.86□□□□□ -1.79
TY1B-AO13527 YOR338WYOR338W 1092 nt3.86□□□□□ -1.79
TY1B-AO13527 DIB1YPR082C 432 nt3.86□□□□□ -1.79
TY1B-AO13527 RIT1YMR283C 1542 nt3.85□□□□□ -1.79
TY1B-AO13527 FRE4YNR060W 2160 nt3.85□□□□□ -1.79
TY1B-AO13527 TRX3YCR083W 384 nt3.85□□□□□ -1.79
TY1B-AO13527 PEX10YDR265W 1014 nt3.85□□□□□ -1.79
TY1B-AO13527 YGL214WYGL214W 486 nt3.85□□□□□ -1.79
TY1B-AO13527 YIL025CYIL025C 375 nt3.85□□□□□ -1.79
TY1B-AO13527 YIR014WYIR014W 729 nt3.85□□□□□ -1.79
TY1B-AO13527 YJR037WYJR037W 384 nt3.85□□□□□ -1.79
TY1B-AO13527 SEC65YML105C 822 nt3.85□□□□□ -1.79
TY1B-AO13527 YMR122W-AYMR122W-A 255 nt3.85□□□□□ -1.79
TY1B-AO13527 RUF20RUF20 443 nt3.85□□□□□ -1.79
TY1B-AO13527 RRG9YNL213C 645 nt3.85□□□□□ -1.79
TY1B-AO13527 DGA1YOR245C 1257 nt3.85□□□□□ -1.79
TY1B-AO13527 RFM1YOR279C 933 nt3.85□□□□□ -1.79
TY1B-AO13527 RRP14YKL082C 1305 nt3.85□□□□□ -1.79
TY1B-AO13527 PHO5YBR093C 1404 nt3.85□□□□□ -1.79
TY1B-AO13527 NSP1YJL041W 2472 nt3.84□□□□□ -1.79
TY1B-AO13527 YCR015CYCR015C 954 nt3.84□□□□□ -1.79
TY1B-AO13527 tK(UUU)DtK(UUU)D 73 nt3.84□□□□□ -1.79
TY1B-AO13527 tK(UUU)G1tK(UUU)G1 73 nt3.84□□□□□ -1.79
TY1B-AO13527 tK(UUU)G2tK(UUU)G2 73 nt3.84□□□□□ -1.79
TY1B-AO13527 tK(UUU)KtK(UUU)K 73 nt3.84□□□□□ -1.79
TY1B-AO13527 tK(UUU)LtK(UUU)L 73 nt3.84□□□□□ -1.79
TY1B-AO13527 tK(UUU)OtK(UUU)O 73 nt3.84□□□□□ -1.79
TY1B-AO13527 tK(UUU)PtK(UUU)P 73 nt3.84□□□□□ -1.79
TY1B-AO13527 MDJ2YNL328C 441 nt3.84□□□□□ -1.79
TY1B-AO13527 YBL096CYBL096C 309 nt3.84□□□□□ -1.79
TY1B-AO13527 SUT2YPR009W 807 nt3.84□□□□□ -1.79
TY1B-AO13527 RSC1YGR056W 2787 nt3.84□□□□□ -1.8
TY1B-AO13527 TFC1YBR123C 1950 nt3.83□□□□□ -1.8
TY1B-AO13527 GAC1YOR178C 2382 nt3.83□□□□□ -1.8
TY1B-AO13527 QRI7YDL104C 1224 nt3.83□□□□□ -1.8
TY1B-AO13527 YER039C-AYER039C-A 219 nt3.83□□□□□ -1.8
TY1B-AO13527 SEC53YFL045C 765 nt3.83□□□□□ -1.8
TY1B-AO13527 LSM12YHR121W 564 nt3.83□□□□□ -1.8
TY1B-AO13527 MOH1YBL049W 417 nt3.83□□□□□ -1.8
TY1B-AO13527 UAF30YOR295W 687 nt3.83□□□□□ -1.8
TY1B-AO13527 MIG1YGL035C 1515 nt3.83□□□□□ -1.8
TY1B-AO13527 HAP4YKL109W 1665 nt3.83□□□□□ -1.8
TY1B-AO13527 ATP25YMR098C 1839 nt3.83□□□□□ -1.8
TY1B-AO13527 SSE2YBR169C 2082 nt3.83□□□□□ -1.8
TY1B-AO13527 YDR089WYDR089W 2610 nt3.82□□□□□ -1.8
TY1B-AO13527 DSL1YNL258C 2265 nt3.82□□□□□ -1.8
TY1B-AO13527 ACK1YDL203C 1872 nt3.82□□□□□ -1.8
TY1B-AO13527 YKR015CYKR015C 1707 nt3.82□□□□□ -1.8
TY1B-AO13527 CLG1YGL215W 1359 nt3.82□□□□□ -1.8
TY1B-AO13527 PST1YDR055W 1335 nt3.82□□□□□ -1.8
TY1B-AO13527 PDS1YDR113C 1122 nt3.82□□□□□ -1.8
TY1B-AO13527 YFL065CYFL065C 309 nt3.82□□□□□ -1.8
TY1B-AO13527 MTD1YKR080W 963 nt3.82□□□□□ -1.8
TY1B-AO13527 YLL047WYLL047W 384 nt3.82□□□□□ -1.8
TY1B-AO13527 RPS28BYLR264W 204 nt3.82□□□□□ -1.8
TY1B-AO13527 YPR142CYPR142C 564 nt3.82□□□□□ -1.8
TY1B-AO13527 CHD1YER164W 4407 nt3.82□□□□□ -1.8
TY1B-AO13527 RCY1YJL204C 2523 nt3.82□□□□□ -1.8
TY1B-AO13527 ARG2YJL071W 1725 nt3.81□□□□□ -1.8
TY1B-AO13527 RRI1YDL216C 1323 nt3.81□□□□□ -1.8
TY1B-AO13527 PCL2YDL127W 927 nt3.81□□□□□ -1.8
TY1B-AO13527 FRQ1YDR373W 573 nt3.81□□□□□ -1.8
TY1B-AO13527 RPL13BYMR142C 600 nt3.81□□□□□ -1.8
TY1B-AO13527 RFC3YNL290W 1023 nt3.81□□□□□ -1.8
TY1B-AO13527 CPR8YNR028W 927 nt3.81□□□□□ -1.8
TY1B-AO13527 MUM2YBR057C 1101 nt3.81□□□□□ -1.8
TY1B-AO13527 SEC15YGL233W 2733 nt3.8□□□□□ -1.8
TY1B-AO13527 GCN5YGR252W 1320 nt3.8□□□□□ -1.8
TY1B-AO13527 OPI6YDL096C 327 nt3.8□□□□□ -1.8
TY1B-AO13527 LIF1YGL090W 1266 nt3.8□□□□□ -1.8
TY1B-AO13527 PPE1YHR075C 1203 nt3.8□□□□□ -1.8
TY1B-AO13527 CAB2YIL083C 1098 nt3.8□□□□□ -1.8
TY1B-AO13527 YLR042CYLR042C 486 nt3.8□□□□□ -1.8
TY1B-AO13527 RPS10BYMR230W 318 nt3.8□□□□□ -1.8
TY1B-AO13527 YBR242WYBR242W 717 nt3.8□□□□□ -1.8
TY1B-AO13527 YGR237CYGR237C 2358 nt3.8□□□□□ -1.8
TY1B-AO13527 URA2YJL130C 6645 nt3.79□□□□□ -1.8
TY1B-AO13527 KTR6YPL053C 1341 nt3.79□□□□□ -1.8
TY1B-AO13527 RRG1YDR065W 1098 nt3.79□□□□□ -1.8
TY1B-AO13527 AGE2YIL044C 897 nt3.79□□□□□ -1.8
TY1B-AO13527 TIR2YOR010C 756 nt3.79□□□□□ -1.8
TY1B-AO13527 YOR114WYOR114W 885 nt3.79□□□□□ -1.8
TY1B-AO13527 SAS5YOR213C 747 nt3.79□□□□□ -1.8
TY1B-AO13527 GIS4YML006C 2325 nt3.79□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 19.1 ms