Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 SLC29A4P1-201ENST00000398760 971 ntBASIC20.91■□□□□ 0.94
TAF4O00268 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.91■□□□□ 0.94
TAF4O00268 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.91■□□□□ 0.94
TAF4O00268 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TAF4O00268 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.91■□□□□ 0.94
TAF4O00268 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TAF4O00268 AC133041.1-202ENST00000642053 222 ntBASIC20.91■□□□□ 0.94
TAF4O00268 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TAF4O00268 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.9■□□□□ 0.94
TAF4O00268 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TAF4O00268 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.9■□□□□ 0.94
TAF4O00268 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TAF4O00268 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TAF4O00268 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TAF4O00268 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TAF4O00268 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TAF4O00268 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TAF4O00268 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TAF4O00268 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.9■□□□□ 0.94
TAF4O00268 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.9■□□□□ 0.94
TAF4O00268 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.9■□□□□ 0.94
TAF4O00268 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.9■□□□□ 0.94
TAF4O00268 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TAF4O00268 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TAF4O00268 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
TAF4O00268 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
TAF4O00268 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
TAF4O00268 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
TAF4O00268 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TAF4O00268 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
TAF4O00268 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
TAF4O00268 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
TAF4O00268 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.89■□□□□ 0.93
TAF4O00268 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TAF4O00268 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.89■□□□□ 0.93
TAF4O00268 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TAF4O00268 AC073210.2-201ENST00000430369 194 ntBASIC20.89■□□□□ 0.93
TAF4O00268 AC005181.1-201ENST00000604782 1256 ntBASIC20.89■□□□□ 0.93
TAF4O00268 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TAF4O00268 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.89■□□□□ 0.93
TAF4O00268 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.89■□□□□ 0.93
TAF4O00268 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TAF4O00268 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TAF4O00268 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TAF4O00268 PKD1P6-201ENST00000343738 4769 ntBASIC20.88■□□□□ 0.93
TAF4O00268 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
TAF4O00268 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TAF4O00268 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.88■□□□□ 0.93
TAF4O00268 AC098934.4-201ENST00000564127 592 ntBASIC20.88■□□□□ 0.93
TAF4O00268 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TAF4O00268 AC231657.2-201ENST00000624556 255 ntBASIC20.88■□□□□ 0.93
TAF4O00268 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TAF4O00268 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TAF4O00268 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.88■□□□□ 0.93
TAF4O00268 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TAF4O00268 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
TAF4O00268 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TAF4O00268 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TAF4O00268 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TAF4O00268 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.87■□□□□ 0.93
TAF4O00268 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.87■□□□□ 0.93
TAF4O00268 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TAF4O00268 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
TAF4O00268 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TAF4O00268 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TAF4O00268 AL596275.1-201ENST00000423464 877 ntBASIC20.87■□□□□ 0.93
TAF4O00268 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.87■□□□□ 0.93
TAF4O00268 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.87■□□□□ 0.93
TAF4O00268 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.87■□□□□ 0.93
TAF4O00268 DUX4L16-201ENST00000555130 1264 ntBASIC20.87■□□□□ 0.93
TAF4O00268 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TAF4O00268 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TAF4O00268 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TAF4O00268 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
TAF4O00268 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TAF4O00268 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.87■□□□□ 0.93
TAF4O00268 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TAF4O00268 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
TAF4O00268 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.86■□□□□ 0.93
TAF4O00268 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TAF4O00268 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TAF4O00268 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.86■□□□□ 0.93
TAF4O00268 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TAF4O00268 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TAF4O00268 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.86■□□□□ 0.93
TAF4O00268 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.86■□□□□ 0.93
TAF4O00268 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.86■□□□□ 0.93
TAF4O00268 SMUG1P1-201ENST00000590640 811 ntBASIC20.86■□□□□ 0.93
TAF4O00268 BX005040.4-201ENST00000637145 1518 ntBASIC20.86■□□□□ 0.93
TAF4O00268 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TAF4O00268 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
TAF4O00268 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
TAF4O00268 EP400NL-214ENST00000641289 2402 ntBASIC20.86■□□□□ 0.93
TAF4O00268 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
TAF4O00268 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
TAF4O00268 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TAF4O00268 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.85■□□□□ 0.93
TAF4O00268 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TAF4O00268 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
TAF4O00268 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms