Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.31■■□□□ 1
TLR4O00206 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.31■■□□□ 1
TLR4O00206 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.31■■□□□ 1
TLR4O00206 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.31■■□□□ 1
TLR4O00206 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.31■■□□□ 1
TLR4O00206 NCF1B-203ENST00000435988 1254 ntBASIC21.31■■□□□ 1
TLR4O00206 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.31■■□□□ 1
TLR4O00206 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
TLR4O00206 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.31■■□□□ 1
TLR4O00206 AL109923.1-201ENST00000618799 583 ntBASIC21.31■■□□□ 1
TLR4O00206 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
TLR4O00206 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.31■■□□□ 1
TLR4O00206 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TLR4O00206 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.3■■□□□ 1
TLR4O00206 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
TLR4O00206 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.3■■□□□ 1
TLR4O00206 AC079089.2-201ENST00000531211 1277 ntBASIC21.3■■□□□ 1
TLR4O00206 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.3■■□□□ 1
TLR4O00206 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.3■■□□□ 1
TLR4O00206 MFSD11-216ENST00000590393 1141 ntBASIC21.3■■□□□ 1
TLR4O00206 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TLR4O00206 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.29■■□□□ 1
TLR4O00206 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TLR4O00206 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
TLR4O00206 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
TLR4O00206 MIR663A-201ENST00000385250 93 ntBASIC21.29■■□□□ 1
TLR4O00206 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.29■■□□□ 1
TLR4O00206 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TLR4O00206 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
TLR4O00206 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.28■■□□□ 1
TLR4O00206 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TLR4O00206 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.28■■□□□ 1
TLR4O00206 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
TLR4O00206 LINC01960-201ENST00000563759 1884 ntBASIC21.28■■□□□ 1
TLR4O00206 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.28■■□□□ 1
TLR4O00206 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
TLR4O00206 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TLR4O00206 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TLR4O00206 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.27■■□□□ 1
TLR4O00206 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
TLR4O00206 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TLR4O00206 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.27■■□□□ 1
TLR4O00206 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.27■■□□□ 1
TLR4O00206 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.27■■□□□ 1
TLR4O00206 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.27■■□□□ 1
TLR4O00206 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.27■■□□□ 1
TLR4O00206 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.27■■□□□ 1
TLR4O00206 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
TLR4O00206 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.26■□□□□ 0.99
TLR4O00206 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TLR4O00206 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TLR4O00206 AL355802.2-201ENST00000402069 882 ntBASIC21.26■□□□□ 0.99
TLR4O00206 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.26■□□□□ 0.99
TLR4O00206 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.26■□□□□ 0.99
TLR4O00206 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
TLR4O00206 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TLR4O00206 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
TLR4O00206 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.26■□□□□ 0.99
TLR4O00206 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
TLR4O00206 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.26■□□□□ 0.99
TLR4O00206 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
TLR4O00206 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TLR4O00206 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TLR4O00206 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TLR4O00206 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TLR4O00206 AC055733.4-201ENST00000638462 1354 ntBASIC21.25■□□□□ 0.99
TLR4O00206 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.25■□□□□ 0.99
TLR4O00206 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
TLR4O00206 GPX1P1-201ENST00000388829 606 ntBASIC21.25■□□□□ 0.99
TLR4O00206 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TLR4O00206 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.25■□□□□ 0.99
TLR4O00206 AP001160.3-201ENST00000601484 763 ntBASIC21.25■□□□□ 0.99
TLR4O00206 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.25■□□□□ 0.99
TLR4O00206 AC079834.2-201ENST00000609776 1949 ntBASIC21.25■□□□□ 0.99
TLR4O00206 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.25■□□□□ 0.99
TLR4O00206 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TLR4O00206 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TLR4O00206 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TLR4O00206 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TLR4O00206 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TLR4O00206 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TLR4O00206 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
TLR4O00206 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TLR4O00206 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.24■□□□□ 0.99
TLR4O00206 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.24■□□□□ 0.99
TLR4O00206 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.24■□□□□ 0.99
TLR4O00206 UBE2DNL-204ENST00000602536 740 ntBASIC21.24■□□□□ 0.99
TLR4O00206 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.24■□□□□ 0.99
TLR4O00206 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.24■□□□□ 0.99
TLR4O00206 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TLR4O00206 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TLR4O00206 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TLR4O00206 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
TLR4O00206 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TLR4O00206 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TLR4O00206 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TLR4O00206 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.23■□□□□ 0.99
TLR4O00206 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
TLR4O00206 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TLR4O00206 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms