Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC24.2■■□□□ 1.46
DDX39AO00148 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC24.19■■□□□ 1.46
DDX39AO00148 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
DDX39AO00148 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
DDX39AO00148 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC24.19■■□□□ 1.46
DDX39AO00148 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC24.19■■□□□ 1.46
DDX39AO00148 CPT2-209ENST00000636935 803 ntTSL 5 BASIC24.19■■□□□ 1.46
DDX39AO00148 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
DDX39AO00148 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
DDX39AO00148 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
DDX39AO00148 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
DDX39AO00148 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
DDX39AO00148 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
DDX39AO00148 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC24.19■■□□□ 1.46
DDX39AO00148 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC24.18■■□□□ 1.46
DDX39AO00148 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
DDX39AO00148 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
DDX39AO00148 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
DDX39AO00148 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC24.18■■□□□ 1.46
DDX39AO00148 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
DDX39AO00148 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC24.18■■□□□ 1.46
DDX39AO00148 ESRRAP2-201ENST00000418437 1549 ntBASIC24.18■■□□□ 1.46
DDX39AO00148 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
DDX39AO00148 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC24.18■■□□□ 1.46
DDX39AO00148 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
DDX39AO00148 AC055733.4-201ENST00000638462 1354 ntBASIC24.17■■□□□ 1.46
DDX39AO00148 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
DDX39AO00148 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
DDX39AO00148 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
DDX39AO00148 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
DDX39AO00148 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC24.17■■□□□ 1.46
DDX39AO00148 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC24.17■■□□□ 1.46
DDX39AO00148 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC24.17■■□□□ 1.46
DDX39AO00148 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
DDX39AO00148 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
DDX39AO00148 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
DDX39AO00148 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
DDX39AO00148 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
DDX39AO00148 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC24.16■■□□□ 1.46
DDX39AO00148 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
DDX39AO00148 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
DDX39AO00148 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC24.16■■□□□ 1.46
DDX39AO00148 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
DDX39AO00148 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC24.16■■□□□ 1.46
DDX39AO00148 AC004911.1-201ENST00000416316 871 ntBASIC24.16■■□□□ 1.46
DDX39AO00148 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC24.16■■□□□ 1.46
DDX39AO00148 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC24.16■■□□□ 1.46
DDX39AO00148 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC24.16■■□□□ 1.46
DDX39AO00148 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC24.16■■□□□ 1.46
DDX39AO00148 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC24.16■■□□□ 1.46
DDX39AO00148 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
DDX39AO00148 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC24.16■■□□□ 1.46
DDX39AO00148 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC24.16■■□□□ 1.46
DDX39AO00148 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC24.16■■□□□ 1.46
DDX39AO00148 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
DDX39AO00148 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
DDX39AO00148 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC24.16■■□□□ 1.46
DDX39AO00148 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
DDX39AO00148 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC24.15■■□□□ 1.46
DDX39AO00148 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
DDX39AO00148 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
DDX39AO00148 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC24.15■■□□□ 1.46
DDX39AO00148 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
DDX39AO00148 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC24.15■■□□□ 1.46
DDX39AO00148 TESC-206ENST00000541210 936 ntTSL 3 BASIC24.15■■□□□ 1.46
DDX39AO00148 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC24.15■■□□□ 1.46
DDX39AO00148 AL137784.2-201ENST00000607332 1000 ntBASIC24.15■■□□□ 1.46
DDX39AO00148 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
DDX39AO00148 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
DDX39AO00148 AC068473.5-201ENST00000616428 2072 ntBASIC24.15■■□□□ 1.46
DDX39AO00148 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC24.15■■□□□ 1.46
DDX39AO00148 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
DDX39AO00148 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.46
DDX39AO00148 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC24.14■■□□□ 1.46
DDX39AO00148 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
DDX39AO00148 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
DDX39AO00148 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC24.14■■□□□ 1.45
DDX39AO00148 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC24.14■■□□□ 1.45
DDX39AO00148 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
DDX39AO00148 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
DDX39AO00148 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
DDX39AO00148 AC127496.7-201ENST00000625110 1798 ntBASIC24.14■■□□□ 1.45
DDX39AO00148 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
DDX39AO00148 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
DDX39AO00148 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
DDX39AO00148 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
DDX39AO00148 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC24.13■■□□□ 1.45
DDX39AO00148 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
DDX39AO00148 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
DDX39AO00148 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
DDX39AO00148 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC24.13■■□□□ 1.45
DDX39AO00148 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC24.13■■□□□ 1.45
DDX39AO00148 AL034346.1-201ENST00000568244 1277 ntBASIC24.13■■□□□ 1.45
DDX39AO00148 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC24.13■■□□□ 1.45
DDX39AO00148 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
DDX39AO00148 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
DDX39AO00148 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC24.13■■□□□ 1.45
DDX39AO00148 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
DDX39AO00148 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
DDX39AO00148 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms