Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MEIS3P1A6NDR6 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.36■□□□□ 0.53
MEIS3P1A6NDR6 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.36■□□□□ 0.53
MEIS3P1A6NDR6 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.36■□□□□ 0.53
MEIS3P1A6NDR6 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.36■□□□□ 0.53
MEIS3P1A6NDR6 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
MEIS3P1A6NDR6 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MEIS3P1A6NDR6 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.35■□□□□ 0.53
MEIS3P1A6NDR6 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.35■□□□□ 0.53
MEIS3P1A6NDR6 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.35■□□□□ 0.53
MEIS3P1A6NDR6 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MEIS3P1A6NDR6 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.35■□□□□ 0.53
MEIS3P1A6NDR6 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MEIS3P1A6NDR6 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC18.35■□□□□ 0.53
MEIS3P1A6NDR6 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.35■□□□□ 0.53
MEIS3P1A6NDR6 CA15P2-201ENST00000611168 834 ntBASIC18.35■□□□□ 0.53
MEIS3P1A6NDR6 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
MEIS3P1A6NDR6 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.35■□□□□ 0.53
MEIS3P1A6NDR6 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MEIS3P1A6NDR6 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MEIS3P1A6NDR6 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MEIS3P1A6NDR6 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
MEIS3P1A6NDR6 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MEIS3P1A6NDR6 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MEIS3P1A6NDR6 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MEIS3P1A6NDR6 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.34■□□□□ 0.53
MEIS3P1A6NDR6 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.34■□□□□ 0.53
MEIS3P1A6NDR6 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MEIS3P1A6NDR6 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MEIS3P1A6NDR6 LINC01521-201ENST00000504184 1943 ntBASIC18.34■□□□□ 0.53
MEIS3P1A6NDR6 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.34■□□□□ 0.53
MEIS3P1A6NDR6 DUX4L4-201ENST00000566884 1269 ntBASIC18.34■□□□□ 0.53
MEIS3P1A6NDR6 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.34■□□□□ 0.53
MEIS3P1A6NDR6 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MEIS3P1A6NDR6 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MEIS3P1A6NDR6 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MEIS3P1A6NDR6 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
MEIS3P1A6NDR6 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MEIS3P1A6NDR6 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MEIS3P1A6NDR6 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
MEIS3P1A6NDR6 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
MEIS3P1A6NDR6 AL121603.2-201ENST00000557373 2117 ntBASIC18.34■□□□□ 0.53
MEIS3P1A6NDR6 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MEIS3P1A6NDR6 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.33■□□□□ 0.53
MEIS3P1A6NDR6 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
MEIS3P1A6NDR6 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
MEIS3P1A6NDR6 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.33■□□□□ 0.53
MEIS3P1A6NDR6 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.33■□□□□ 0.53
MEIS3P1A6NDR6 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MEIS3P1A6NDR6 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MEIS3P1A6NDR6 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MEIS3P1A6NDR6 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.33■□□□□ 0.52
MEIS3P1A6NDR6 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
MEIS3P1A6NDR6 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.33■□□□□ 0.52
MEIS3P1A6NDR6 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.33■□□□□ 0.52
MEIS3P1A6NDR6 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.33■□□□□ 0.52
MEIS3P1A6NDR6 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
MEIS3P1A6NDR6 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
MEIS3P1A6NDR6 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
MEIS3P1A6NDR6 AC026471.6-201ENST00000622954 1905 ntBASIC18.33■□□□□ 0.52
MEIS3P1A6NDR6 LINC01006-201ENST00000333319 2292 ntBASIC18.33■□□□□ 0.52
MEIS3P1A6NDR6 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.33■□□□□ 0.52
MEIS3P1A6NDR6 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MEIS3P1A6NDR6 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
MEIS3P1A6NDR6 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
MEIS3P1A6NDR6 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MEIS3P1A6NDR6 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MEIS3P1A6NDR6 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MEIS3P1A6NDR6 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MEIS3P1A6NDR6 AC005703.6-201ENST00000623265 1329 ntBASIC18.32■□□□□ 0.52
MEIS3P1A6NDR6 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
MEIS3P1A6NDR6 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MEIS3P1A6NDR6 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
MEIS3P1A6NDR6 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.32■□□□□ 0.52
MEIS3P1A6NDR6 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.32■□□□□ 0.52
MEIS3P1A6NDR6 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
MEIS3P1A6NDR6 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MEIS3P1A6NDR6 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MEIS3P1A6NDR6 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MEIS3P1A6NDR6 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.31■□□□□ 0.52
MEIS3P1A6NDR6 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.31■□□□□ 0.52
MEIS3P1A6NDR6 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.31■□□□□ 0.52
MEIS3P1A6NDR6 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
MEIS3P1A6NDR6 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
MEIS3P1A6NDR6 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MEIS3P1A6NDR6 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MEIS3P1A6NDR6 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MEIS3P1A6NDR6 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MEIS3P1A6NDR6 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
MEIS3P1A6NDR6 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
MEIS3P1A6NDR6 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
MEIS3P1A6NDR6 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
MEIS3P1A6NDR6 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MEIS3P1A6NDR6 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.3■□□□□ 0.52
MEIS3P1A6NDR6 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
MEIS3P1A6NDR6 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MEIS3P1A6NDR6 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MEIS3P1A6NDR6 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MEIS3P1A6NDR6 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MEIS3P1A6NDR6 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms