Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
TRBV6-4A0A1B0GX49 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
TRBV6-4A0A1B0GX49 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TRBV6-4A0A1B0GX49 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-4A0A1B0GX49 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-4A0A1B0GX49 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-4A0A1B0GX49 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC15.16■□□□□ 0.02
TRBV6-4A0A1B0GX49 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-4A0A1B0GX49 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC15.15■□□□□ 0.02
TRBV6-4A0A1B0GX49 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC15.15■□□□□ 0.02
TRBV6-4A0A1B0GX49 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV6-4A0A1B0GX49 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV6-4A0A1B0GX49 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TRBV6-4A0A1B0GX49 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC15.15■□□□□ 0.02
TRBV6-4A0A1B0GX49 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
TRBV6-4A0A1B0GX49 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV6-4A0A1B0GX49 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC15.15■□□□□ 0.02
TRBV6-4A0A1B0GX49 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV6-4A0A1B0GX49 AC104564.3-201ENST00000582367 638 ntBASIC15.15■□□□□ 0.02
TRBV6-4A0A1B0GX49 MIR4767-201ENST00000582827 78 ntBASIC15.15■□□□□ 0.02
TRBV6-4A0A1B0GX49 AC233992.3-201ENST00000607491 485 ntBASIC15.15■□□□□ 0.02
TRBV6-4A0A1B0GX49 AL136162.1-201ENST00000607711 1078 ntBASIC15.15■□□□□ 0.02
TRBV6-4A0A1B0GX49 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC15.15■□□□□ 0.02
TRBV6-4A0A1B0GX49 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV6-4A0A1B0GX49 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TRBV6-4A0A1B0GX49 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV6-4A0A1B0GX49 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV6-4A0A1B0GX49 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV6-4A0A1B0GX49 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV6-4A0A1B0GX49 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TRBV6-4A0A1B0GX49 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV6-4A0A1B0GX49 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC15.15■□□□□ 0.02
TRBV6-4A0A1B0GX49 AC135279.3-201ENST00000610945 1311 ntBASIC15.15■□□□□ 0.02
TRBV6-4A0A1B0GX49 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV6-4A0A1B0GX49 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
TRBV6-4A0A1B0GX49 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRBV6-4A0A1B0GX49 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV6-4A0A1B0GX49 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV6-4A0A1B0GX49 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC15.14■□□□□ 0.01
TRBV6-4A0A1B0GX49 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV6-4A0A1B0GX49 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC15.14■□□□□ 0.01
TRBV6-4A0A1B0GX49 TUB-203ENST00000534099 1759 ntTSL 2 BASIC15.14■□□□□ 0.01
TRBV6-4A0A1B0GX49 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV6-4A0A1B0GX49 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TRBV6-4A0A1B0GX49 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC15.14■□□□□ 0.01
TRBV6-4A0A1B0GX49 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC15.14■□□□□ 0.01
TRBV6-4A0A1B0GX49 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC15.14■□□□□ 0.01
TRBV6-4A0A1B0GX49 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV6-4A0A1B0GX49 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV6-4A0A1B0GX49 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV6-4A0A1B0GX49 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC15.14■□□□□ 0.01
TRBV6-4A0A1B0GX49 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
TRBV6-4A0A1B0GX49 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV6-4A0A1B0GX49 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV6-4A0A1B0GX49 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV6-4A0A1B0GX49 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV6-4A0A1B0GX49 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV6-4A0A1B0GX49 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV6-4A0A1B0GX49 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV6-4A0A1B0GX49 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV6-4A0A1B0GX49 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV6-4A0A1B0GX49 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC15.13■□□□□ 0.01
TRBV6-4A0A1B0GX49 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV6-4A0A1B0GX49 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
TRBV6-4A0A1B0GX49 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
TRBV6-4A0A1B0GX49 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC15.13■□□□□ 0.01
TRBV6-4A0A1B0GX49 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV6-4A0A1B0GX49 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC15.13■□□□□ 0.01
TRBV6-4A0A1B0GX49 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC15.13■□□□□ 0.01
TRBV6-4A0A1B0GX49 AC024257.2-201ENST00000549699 147 ntBASIC15.13■□□□□ 0.01
TRBV6-4A0A1B0GX49 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
TRBV6-4A0A1B0GX49 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
TRBV6-4A0A1B0GX49 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC15.13■□□□□ 0.01
TRBV6-4A0A1B0GX49 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC15.13■□□□□ 0.01
TRBV6-4A0A1B0GX49 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV6-4A0A1B0GX49 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC15.12■□□□□ 0.01
TRBV6-4A0A1B0GX49 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV6-4A0A1B0GX49 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC15.12■□□□□ 0.01
TRBV6-4A0A1B0GX49 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV6-4A0A1B0GX49 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV6-4A0A1B0GX49 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC15.12■□□□□ 0.01
TRBV6-4A0A1B0GX49 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV6-4A0A1B0GX49 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV6-4A0A1B0GX49 PEMT-206ENST00000435340 960 ntTSL 5 BASIC15.12■□□□□ 0.01
TRBV6-4A0A1B0GX49 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC15.12■□□□□ 0.01
TRBV6-4A0A1B0GX49 AICDA-202ENST00000537228 667 ntTSL 5 BASIC15.12■□□□□ 0.01
TRBV6-4A0A1B0GX49 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC15.12■□□□□ 0.01
TRBV6-4A0A1B0GX49 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC15.12■□□□□ 0.01
TRBV6-4A0A1B0GX49 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV6-4A0A1B0GX49 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV6-4A0A1B0GX49 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV6-4A0A1B0GX49 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV6-4A0A1B0GX49 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV6-4A0A1B0GX49 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC15.11■□□□□ 0.01
TRBV6-4A0A1B0GX49 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV6-4A0A1B0GX49 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV6-4A0A1B0GX49 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV6-4A0A1B0GX49 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
TRBV6-4A0A1B0GX49 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV6-4A0A1B0GX49 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms