Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV25A0A0B4J276 AC092053.2-201ENST00000640557 1818 ntBASIC16.13■□□□□ 0.17
TRAV25A0A0B4J276 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV25A0A0B4J276 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV25A0A0B4J276 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV25A0A0B4J276 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
TRAV25A0A0B4J276 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV25A0A0B4J276 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV25A0A0B4J276 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC16.13■□□□□ 0.17
TRAV25A0A0B4J276 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC16.13■□□□□ 0.17
TRAV25A0A0B4J276 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TRAV25A0A0B4J276 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TRAV25A0A0B4J276 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV25A0A0B4J276 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TRAV25A0A0B4J276 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV25A0A0B4J276 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV25A0A0B4J276 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV25A0A0B4J276 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV25A0A0B4J276 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV25A0A0B4J276 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAV25A0A0B4J276 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV25A0A0B4J276 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV25A0A0B4J276 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TRAV25A0A0B4J276 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV25A0A0B4J276 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV25A0A0B4J276 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TRAV25A0A0B4J276 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV25A0A0B4J276 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV25A0A0B4J276 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV25A0A0B4J276 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV25A0A0B4J276 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
TRAV25A0A0B4J276 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC16.12■□□□□ 0.17
TRAV25A0A0B4J276 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAV25A0A0B4J276 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC16.12■□□□□ 0.17
TRAV25A0A0B4J276 KRT18P14-201ENST00000534205 1250 ntBASIC16.12■□□□□ 0.17
TRAV25A0A0B4J276 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
TRAV25A0A0B4J276 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC16.12■□□□□ 0.17
TRAV25A0A0B4J276 CCDC92B-201ENST00000575506 885 ntBASIC16.12■□□□□ 0.17
TRAV25A0A0B4J276 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAV25A0A0B4J276 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAV25A0A0B4J276 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV25A0A0B4J276 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV25A0A0B4J276 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV25A0A0B4J276 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV25A0A0B4J276 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TRAV25A0A0B4J276 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV25A0A0B4J276 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC16.12■□□□□ 0.17
TRAV25A0A0B4J276 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV25A0A0B4J276 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
TRAV25A0A0B4J276 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV25A0A0B4J276 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV25A0A0B4J276 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV25A0A0B4J276 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV25A0A0B4J276 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAV25A0A0B4J276 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV25A0A0B4J276 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV25A0A0B4J276 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV25A0A0B4J276 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV25A0A0B4J276 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV25A0A0B4J276 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC16.11■□□□□ 0.17
TRAV25A0A0B4J276 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV25A0A0B4J276 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV25A0A0B4J276 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV25A0A0B4J276 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TRAV25A0A0B4J276 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TRAV25A0A0B4J276 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV25A0A0B4J276 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV25A0A0B4J276 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAV25A0A0B4J276 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV25A0A0B4J276 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV25A0A0B4J276 GALC-202ENST00000393568 2054 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV25A0A0B4J276 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV25A0A0B4J276 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV25A0A0B4J276 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV25A0A0B4J276 AC233723.2-201ENST00000623798 2106 ntBASIC16.1■□□□□ 0.17
TRAV25A0A0B4J276 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV25A0A0B4J276 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
TRAV25A0A0B4J276 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV25A0A0B4J276 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC16.1■□□□□ 0.17
TRAV25A0A0B4J276 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV25A0A0B4J276 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV25A0A0B4J276 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV25A0A0B4J276 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC16.1■□□□□ 0.17
TRAV25A0A0B4J276 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC16.1■□□□□ 0.17
TRAV25A0A0B4J276 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV25A0A0B4J276 AC079140.4-201ENST00000507448 529 ntBASIC16.1■□□□□ 0.17
TRAV25A0A0B4J276 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV25A0A0B4J276 AC087623.3-201ENST00000607047 1098 ntBASIC16.1■□□□□ 0.17
TRAV25A0A0B4J276 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC16.1■□□□□ 0.17
TRAV25A0A0B4J276 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC16.1■□□□□ 0.17
TRAV25A0A0B4J276 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC16.1■□□□□ 0.17
TRAV25A0A0B4J276 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV25A0A0B4J276 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TRAV25A0A0B4J276 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC16.1■□□□□ 0.17
TRAV25A0A0B4J276 AC055733.4-201ENST00000638462 1354 ntBASIC16.1■□□□□ 0.17
TRAV25A0A0B4J276 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV25A0A0B4J276 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV25A0A0B4J276 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRAV25A0A0B4J276 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TRAV25A0A0B4J276 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms