Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV10A0A0B4J240 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV10A0A0B4J240 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC15.15■□□□□ 0.02
TRAV10A0A0B4J240 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV10A0A0B4J240 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV10A0A0B4J240 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
TRAV10A0A0B4J240 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
TRAV10A0A0B4J240 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
TRAV10A0A0B4J240 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV10A0A0B4J240 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV10A0A0B4J240 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV10A0A0B4J240 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV10A0A0B4J240 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV10A0A0B4J240 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV10A0A0B4J240 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV10A0A0B4J240 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC15.15■□□□□ 0.02
TRAV10A0A0B4J240 WWOX-218ENST00000627394 894 ntTSL 5 BASIC15.15■□□□□ 0.02
TRAV10A0A0B4J240 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV10A0A0B4J240 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV10A0A0B4J240 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV10A0A0B4J240 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV10A0A0B4J240 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV10A0A0B4J240 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV10A0A0B4J240 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV10A0A0B4J240 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV10A0A0B4J240 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TRAV10A0A0B4J240 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAV10A0A0B4J240 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV10A0A0B4J240 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
TRAV10A0A0B4J240 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
TRAV10A0A0B4J240 MFF-207ENST00000409565 1548 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV10A0A0B4J240 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV10A0A0B4J240 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV10A0A0B4J240 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV10A0A0B4J240 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV10A0A0B4J240 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV10A0A0B4J240 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV10A0A0B4J240 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV10A0A0B4J240 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
TRAV10A0A0B4J240 SPI1-203ENST00000533030 661 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV10A0A0B4J240 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAV10A0A0B4J240 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC15.14■□□□□ 0.01
TRAV10A0A0B4J240 AC104187.1-201ENST00000607510 612 ntBASIC15.14■□□□□ 0.01
TRAV10A0A0B4J240 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC15.14■□□□□ 0.01
TRAV10A0A0B4J240 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV10A0A0B4J240 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV10A0A0B4J240 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV10A0A0B4J240 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV10A0A0B4J240 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV10A0A0B4J240 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV10A0A0B4J240 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV10A0A0B4J240 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV10A0A0B4J240 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV10A0A0B4J240 ID1-201ENST00000376105 1233 ntBASIC15.13■□□□□ 0.01
TRAV10A0A0B4J240 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
TRAV10A0A0B4J240 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
TRAV10A0A0B4J240 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV10A0A0B4J240 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TRAV10A0A0B4J240 MDK-213ENST00000617138 635 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV10A0A0B4J240 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV10A0A0B4J240 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV10A0A0B4J240 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV10A0A0B4J240 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TRAV10A0A0B4J240 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV10A0A0B4J240 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV10A0A0B4J240 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAV10A0A0B4J240 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV10A0A0B4J240 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV10A0A0B4J240 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV10A0A0B4J240 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAV10A0A0B4J240 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV10A0A0B4J240 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV10A0A0B4J240 AC026185.1-201ENST00000445748 174 ntBASIC15.12■□□□□ 0.01
TRAV10A0A0B4J240 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV10A0A0B4J240 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV10A0A0B4J240 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC15.12■□□□□ 0.01
TRAV10A0A0B4J240 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC15.12■□□□□ 0.01
TRAV10A0A0B4J240 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV10A0A0B4J240 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC15.12■□□□□ 0.01
TRAV10A0A0B4J240 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV10A0A0B4J240 AC073111.5-205ENST00000641717 521 ntBASIC15.12■□□□□ 0.01
TRAV10A0A0B4J240 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV10A0A0B4J240 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TRAV10A0A0B4J240 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV10A0A0B4J240 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV10A0A0B4J240 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV10A0A0B4J240 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV10A0A0B4J240 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV10A0A0B4J240 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
TRAV10A0A0B4J240 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV10A0A0B4J240 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC15.11■□□□□ 0.01
TRAV10A0A0B4J240 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV10A0A0B4J240 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV10A0A0B4J240 AC011767.1-201ENST00000617410 1153 ntBASIC15.11■□□□□ 0.01
TRAV10A0A0B4J240 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC15.11■□□□□ 0.01
TRAV10A0A0B4J240 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TRAV10A0A0B4J240 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV10A0A0B4J240 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV10A0A0B4J240 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV10A0A0B4J240 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms