Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV13-2A0A0B4J235 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV13-2A0A0B4J235 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TRAV13-2A0A0B4J235 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV13-2A0A0B4J235 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV13-2A0A0B4J235 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
TRAV13-2A0A0B4J235 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC14.16□□□□□ -0.14
TRAV13-2A0A0B4J235 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV13-2A0A0B4J235 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV13-2A0A0B4J235 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV13-2A0A0B4J235 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV13-2A0A0B4J235 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV13-2A0A0B4J235 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
TRAV13-2A0A0B4J235 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV13-2A0A0B4J235 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV13-2A0A0B4J235 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV13-2A0A0B4J235 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TRAV13-2A0A0B4J235 AF106564.1-201ENST00000607058 2553 ntBASIC14.16□□□□□ -0.14
TRAV13-2A0A0B4J235 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV13-2A0A0B4J235 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV13-2A0A0B4J235 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV13-2A0A0B4J235 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAV13-2A0A0B4J235 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TRAV13-2A0A0B4J235 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV13-2A0A0B4J235 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV13-2A0A0B4J235 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV13-2A0A0B4J235 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV13-2A0A0B4J235 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
TRAV13-2A0A0B4J235 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TRAV13-2A0A0B4J235 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TRAV13-2A0A0B4J235 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TRAV13-2A0A0B4J235 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV13-2A0A0B4J235 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV13-2A0A0B4J235 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TRAV13-2A0A0B4J235 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
TRAV13-2A0A0B4J235 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
TRAV13-2A0A0B4J235 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
TRAV13-2A0A0B4J235 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV13-2A0A0B4J235 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV13-2A0A0B4J235 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TRAV13-2A0A0B4J235 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV13-2A0A0B4J235 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV13-2A0A0B4J235 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV13-2A0A0B4J235 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV13-2A0A0B4J235 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV13-2A0A0B4J235 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV13-2A0A0B4J235 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV13-2A0A0B4J235 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV13-2A0A0B4J235 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TRAV13-2A0A0B4J235 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV13-2A0A0B4J235 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV13-2A0A0B4J235 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
TRAV13-2A0A0B4J235 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
TRAV13-2A0A0B4J235 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV13-2A0A0B4J235 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
TRAV13-2A0A0B4J235 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV13-2A0A0B4J235 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
TRAV13-2A0A0B4J235 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV13-2A0A0B4J235 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV13-2A0A0B4J235 AC011551.1-201ENST00000614101 683 ntBASIC14.14□□□□□ -0.15
TRAV13-2A0A0B4J235 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
TRAV13-2A0A0B4J235 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV13-2A0A0B4J235 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV13-2A0A0B4J235 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV13-2A0A0B4J235 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV13-2A0A0B4J235 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV13-2A0A0B4J235 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV13-2A0A0B4J235 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TRAV13-2A0A0B4J235 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV13-2A0A0B4J235 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV13-2A0A0B4J235 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV13-2A0A0B4J235 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV13-2A0A0B4J235 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV13-2A0A0B4J235 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
TRAV13-2A0A0B4J235 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV13-2A0A0B4J235 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV13-2A0A0B4J235 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV13-2A0A0B4J235 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC14.13□□□□□ -0.15
TRAV13-2A0A0B4J235 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV13-2A0A0B4J235 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV13-2A0A0B4J235 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV13-2A0A0B4J235 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV13-2A0A0B4J235 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC14.13□□□□□ -0.15
TRAV13-2A0A0B4J235 HES4-204ENST00000484667 667 ntTSL 3 BASIC14.13□□□□□ -0.15
TRAV13-2A0A0B4J235 METRNL-202ENST00000570778 967 ntTSL 5 BASIC14.13□□□□□ -0.15
TRAV13-2A0A0B4J235 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV13-2A0A0B4J235 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV13-2A0A0B4J235 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV13-2A0A0B4J235 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV13-2A0A0B4J235 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV13-2A0A0B4J235 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV13-2A0A0B4J235 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV13-2A0A0B4J235 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV13-2A0A0B4J235 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV13-2A0A0B4J235 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAV13-2A0A0B4J235 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV13-2A0A0B4J235 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV13-2A0A0B4J235 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV13-2A0A0B4J235 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV13-2A0A0B4J235 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms