Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV2A0A0B4J234 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TRAV2A0A0B4J234 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC16.2■□□□□ 0.18
TRAV2A0A0B4J234 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV2A0A0B4J234 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV2A0A0B4J234 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV2A0A0B4J234 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TRAV2A0A0B4J234 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC16.2■□□□□ 0.18
TRAV2A0A0B4J234 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
TRAV2A0A0B4J234 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV2A0A0B4J234 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV2A0A0B4J234 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV2A0A0B4J234 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV2A0A0B4J234 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV2A0A0B4J234 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV2A0A0B4J234 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV2A0A0B4J234 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
TRAV2A0A0B4J234 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV2A0A0B4J234 AC080038.3-201ENST00000623346 1952 ntBASIC16.19■□□□□ 0.18
TRAV2A0A0B4J234 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TRAV2A0A0B4J234 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC16.19■□□□□ 0.18
TRAV2A0A0B4J234 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC16.19■□□□□ 0.18
TRAV2A0A0B4J234 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC16.19■□□□□ 0.18
TRAV2A0A0B4J234 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV2A0A0B4J234 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC16.19■□□□□ 0.18
TRAV2A0A0B4J234 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV2A0A0B4J234 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TRAV2A0A0B4J234 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TRAV2A0A0B4J234 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC16.19■□□□□ 0.18
TRAV2A0A0B4J234 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
TRAV2A0A0B4J234 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV2A0A0B4J234 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV2A0A0B4J234 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV2A0A0B4J234 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV2A0A0B4J234 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV2A0A0B4J234 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV2A0A0B4J234 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV2A0A0B4J234 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV2A0A0B4J234 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV2A0A0B4J234 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TRAV2A0A0B4J234 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV2A0A0B4J234 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC16.18■□□□□ 0.18
TRAV2A0A0B4J234 MFF-208ENST00000409616 1247 ntTSL 5 BASIC16.18■□□□□ 0.18
TRAV2A0A0B4J234 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV2A0A0B4J234 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV2A0A0B4J234 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV2A0A0B4J234 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV2A0A0B4J234 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV2A0A0B4J234 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TRAV2A0A0B4J234 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV2A0A0B4J234 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV2A0A0B4J234 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV2A0A0B4J234 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC16.17■□□□□ 0.18
TRAV2A0A0B4J234 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC16.17■□□□□ 0.18
TRAV2A0A0B4J234 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV2A0A0B4J234 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV2A0A0B4J234 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV2A0A0B4J234 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV2A0A0B4J234 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV2A0A0B4J234 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TRAV2A0A0B4J234 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC16.17■□□□□ 0.18
TRAV2A0A0B4J234 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV2A0A0B4J234 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV2A0A0B4J234 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC16.17■□□□□ 0.18
TRAV2A0A0B4J234 SMUG1P1-201ENST00000590640 811 ntBASIC16.17■□□□□ 0.18
TRAV2A0A0B4J234 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV2A0A0B4J234 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TRAV2A0A0B4J234 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC16.17■□□□□ 0.18
TRAV2A0A0B4J234 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TRAV2A0A0B4J234 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV2A0A0B4J234 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV2A0A0B4J234 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV2A0A0B4J234 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV2A0A0B4J234 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV2A0A0B4J234 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC16.16■□□□□ 0.18
TRAV2A0A0B4J234 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TRAV2A0A0B4J234 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV2A0A0B4J234 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV2A0A0B4J234 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAV2A0A0B4J234 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAV2A0A0B4J234 AC105233.4-201ENST00000642045 216 ntBASIC16.16■□□□□ 0.18
TRAV2A0A0B4J234 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV2A0A0B4J234 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV2A0A0B4J234 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV2A0A0B4J234 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TRAV2A0A0B4J234 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.16■□□□□ 0.18
TRAV2A0A0B4J234 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV2A0A0B4J234 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV2A0A0B4J234 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC16.16■□□□□ 0.18
TRAV2A0A0B4J234 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
TRAV2A0A0B4J234 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV2A0A0B4J234 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV2A0A0B4J234 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TRAV2A0A0B4J234 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV2A0A0B4J234 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV2A0A0B4J234 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV2A0A0B4J234 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAV2A0A0B4J234 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV2A0A0B4J234 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV2A0A0B4J234 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms