Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV26-1A0A087WT03 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV26-1A0A087WT03 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV26-1A0A087WT03 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV26-1A0A087WT03 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TRAV26-1A0A087WT03 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
TRAV26-1A0A087WT03 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV26-1A0A087WT03 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV26-1A0A087WT03 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
TRAV26-1A0A087WT03 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV26-1A0A087WT03 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV26-1A0A087WT03 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV26-1A0A087WT03 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV26-1A0A087WT03 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC15.42■□□□□ 0.06
TRAV26-1A0A087WT03 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV26-1A0A087WT03 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV26-1A0A087WT03 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRAV26-1A0A087WT03 STX4-202ENST00000394998 1498 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV26-1A0A087WT03 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
TRAV26-1A0A087WT03 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV26-1A0A087WT03 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV26-1A0A087WT03 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
TRAV26-1A0A087WT03 SNX3-202ENST00000349379 890 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV26-1A0A087WT03 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV26-1A0A087WT03 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRAV26-1A0A087WT03 MIR939-201ENST00000401314 82 ntBASIC15.42■□□□□ 0.06
TRAV26-1A0A087WT03 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV26-1A0A087WT03 MAG-206ENST00000597035 542 ntTSL 4 BASIC15.42■□□□□ 0.06
TRAV26-1A0A087WT03 AL031432.3-201ENST00000607698 485 ntBASIC15.42■□□□□ 0.06
TRAV26-1A0A087WT03 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV26-1A0A087WT03 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV26-1A0A087WT03 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
TRAV26-1A0A087WT03 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
TRAV26-1A0A087WT03 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
TRAV26-1A0A087WT03 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV26-1A0A087WT03 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV26-1A0A087WT03 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV26-1A0A087WT03 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV26-1A0A087WT03 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAV26-1A0A087WT03 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV26-1A0A087WT03 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TRAV26-1A0A087WT03 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV26-1A0A087WT03 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRAV26-1A0A087WT03 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
TRAV26-1A0A087WT03 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
TRAV26-1A0A087WT03 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV26-1A0A087WT03 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TRAV26-1A0A087WT03 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV26-1A0A087WT03 AC091305.1-201ENST00000479476 895 ntBASIC15.41■□□□□ 0.06
TRAV26-1A0A087WT03 SUDS3P1-201ENST00000505831 966 ntBASIC15.41■□□□□ 0.06
TRAV26-1A0A087WT03 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAV26-1A0A087WT03 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAV26-1A0A087WT03 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV26-1A0A087WT03 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAV26-1A0A087WT03 AL136967.2-201ENST00000623968 743 ntBASIC15.41■□□□□ 0.06
TRAV26-1A0A087WT03 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV26-1A0A087WT03 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
TRAV26-1A0A087WT03 COMT-203ENST00000403184 2217 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAV26-1A0A087WT03 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
TRAV26-1A0A087WT03 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV26-1A0A087WT03 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAV26-1A0A087WT03 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAV26-1A0A087WT03 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV26-1A0A087WT03 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV26-1A0A087WT03 RASA4CP-201ENST00000424092 1398 ntBASIC15.4■□□□□ 0.06
TRAV26-1A0A087WT03 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV26-1A0A087WT03 GRAMD4P2-201ENST00000423297 1097 ntBASIC15.4■□□□□ 0.06
TRAV26-1A0A087WT03 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAV26-1A0A087WT03 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAV26-1A0A087WT03 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV26-1A0A087WT03 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV26-1A0A087WT03 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV26-1A0A087WT03 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV26-1A0A087WT03 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV26-1A0A087WT03 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TRAV26-1A0A087WT03 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
TRAV26-1A0A087WT03 LINC01960-201ENST00000563759 1884 ntBASIC15.4■□□□□ 0.06
TRAV26-1A0A087WT03 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
TRAV26-1A0A087WT03 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV26-1A0A087WT03 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV26-1A0A087WT03 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TRAV26-1A0A087WT03 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV26-1A0A087WT03 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
TRAV26-1A0A087WT03 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAV26-1A0A087WT03 ESRRAP2-201ENST00000418437 1549 ntBASIC15.39■□□□□ 0.05
TRAV26-1A0A087WT03 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV26-1A0A087WT03 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV26-1A0A087WT03 HYI-206ENST00000372434 1025 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAV26-1A0A087WT03 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
TRAV26-1A0A087WT03 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV26-1A0A087WT03 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAV26-1A0A087WT03 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV26-1A0A087WT03 CA15P2-201ENST00000611168 834 ntBASIC15.39■□□□□ 0.05
TRAV26-1A0A087WT03 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV26-1A0A087WT03 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV26-1A0A087WT03 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
TRAV26-1A0A087WT03 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
TRAV26-1A0A087WT03 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV26-1A0A087WT03 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV26-1A0A087WT03 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms