Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 MLN-202ENST00000430124 566 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 CD59-205ENST00000437761 758 ntAPPRIS P2 TSL 4 BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 SLC25A39P1-201ENST00000444461 1065 ntBASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 AC103925.1-201ENST00000453155 771 ntTSL 3 BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 AC079944.2-201ENST00000478867 734 ntBASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 PSCA-204ENST00000513264 551 ntAPPRIS ALT2 TSL 4 BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 PAX5-209ENST00000520154 1255 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 EEF1DP8-201ENST00000534760 536 ntBASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 AP003717.2-201ENST00000534962 898 ntBASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 CACNA1C-IT3-201ENST00000542680 622 ntTSL 3 BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 AL158801.2-201ENST00000554650 554 ntTSL 3 BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 AL133551.1-201ENST00000610279 1222 ntBASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 TTC28-AS1_1.1-201ENST00000614690 162 ntBASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 AC003991.1-211ENST00000631117 870 ntTSL 5 BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 AC093323.2-201ENST00000632154 976 ntBASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 EPM2A-214ENST00000638783 801 ntTSL 5 BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 GSTM4-213ENST00000638994 657 ntTSL 5 BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 EPM2A-229ENST00000640980 647 ntTSL 3 BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 DGKH-203ENST00000379274 4202 ntTSL 2 BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 MAPKBP1-201ENST00000456763 7158 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 DPCR1-203ENST00000636043 5587 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 FLCN-201ENST00000285071 3638 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 CDH3-202ENST00000429102 3611 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 C12orf74-202ENST00000544406 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 CRISPLD2-201ENST00000262424 4586 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 PDGFD-201ENST00000302251 4052 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 NIN-201ENST00000245441 10293 ntAPPRIS P5 TSL 5 BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 SYPL1-201ENST00000011473 2127 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 RABL2B-201ENST00000354869 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 BTNL8-210ENST00000533815 1600 ntTSL 2 BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 TNFAIP3-211ENST00000621150 1613 ntTSL 5 BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 LINC00877-207ENST00000488545 1561 ntTSL 3 BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 IL19-204ENST00000620365 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 SLC3A1-207ENST00000409741 1537 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 NRP1-206ENST00000374867 5877 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 ZSCAN20-202ENST00000373413 2367 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 HDGFL3-201ENST00000299633 12733 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 PIGG-201ENST00000310340 3203 ntAPPRIS P3 TSL 2 BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 TECTA-202ENST00000392793 7426 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 PLEKHG5-205ENST00000377740 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 LAMA4-219ENST00000522006 6438 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 EME1-207ENST00000511648 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 SLC16A7-216ENST00000552432 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 RANGAP1-201ENST00000356244 3060 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 NRAP-204ENST00000369360 5535 ntTSL 5 BASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 HTR3E-206ENST00000440596 1449 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 PLEKHA6-201ENST00000272203 7401 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 ZNF789-209ENST00000483089 2994 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 DPYD-201ENST00000306031 1779 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 AC239801.1-201ENST00000458399 1398 ntBASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 ZNF341-201ENST00000342427 3661 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 PABPC1L-205ENST00000372819 2100 ntTSL 2 BASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 SPATA13-205ENST00000409126 2111 ntTSL 2 BASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 ALDH3A2-203ENST00000395575 3640 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 ISL1-201ENST00000230658 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 REPS1-205ENST00000415951 2424 ntTSL 5 BASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 ATN1-202ENST00000396684 4290 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 UBA3-203ENST00000415609 2004 ntTSL 5 BASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 IMMP1L-201ENST00000278200 795 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 AC111200.1-201ENST00000358778 657 ntBASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 TPI1-202ENST00000396705 1231 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 AL356277.1-201ENST00000401875 267 ntBASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 TXN2-202ENST00000403313 912 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 SERF2-210ENST00000409960 1032 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 AL355298.1-201ENST00000425391 180 ntBASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 AC005220.1-201ENST00000450473 884 ntTSL 5 BASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 FANCD2OS-204ENST00000450660 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 RN7SL728P-201ENST00000464718 300 ntBASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 OR2A1-AS1-203ENST00000468575 568 ntBASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 RN7SL521P-201ENST00000488398 297 ntBASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 NREP-218ENST00000509427 587 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 AP000911.1-205ENST00000527712 594 ntTSL 4 BASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 OLR1-211ENST00000545927 1008 ntTSL 2 BASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 MORF4L1-208ENST00000558746 874 ntTSL 3 BASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 AC005154.1-202ENST00000578293 999 ntTSL 5 BASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 MIR4459-201ENST00000581837 66 ntBASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 SNRPD1-204ENST00000582475 723 ntTSL 3 BASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 MIR4761-201ENST00000585066 82 ntBASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 TMEM205-204ENST00000586218 593 ntTSL 2 BASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 AC011444.2-201ENST00000587759 567 ntTSL 4 BASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 AL355353.1-201ENST00000604014 330 ntBASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 AC036214.2-201ENST00000606512 917 ntBASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 LINC01667-201ENST00000623554 1137 ntTSL 5 BASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 MYH4-201ENST00000255381 6016 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 STRADA-203ENST00000375840 2209 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 SERPINA1-203ENST00000393088 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 LDAH-204ENST00000403006 1895 ntTSL 5 BASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 AL118508.3-201ENST00000623468 1854 ntBASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 COL5A2-201ENST00000374866 6949 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 MCM3-202ENST00000419835 2523 ntTSL 2 BASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 TEX2-204ENST00000583097 4852 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 TEX2-210ENST00000615733 4852 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 PNMA5-201ENST00000361887 3197 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 CDNF-202ENST00000378442 1492 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 CDK7-202ENST00000502604 1455 ntTSL 5 BASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 RNF17-202ENST00000255325 2134 ntTSL 2 BASIC10.93□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms