Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
NPIPA3F8WFD2 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
NPIPA3F8WFD2 RHBDL2-202ENST00000372990 1837 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 MS4A15-202ENST00000405633 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 TCTN3-204ENST00000430368 1778 ntTSL 2 BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 SALL4-201ENST00000217086 5208 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 SIGLEC6-206ENST00000436458 1713 ntTSL 2 BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 ZNF683-202ENST00000403843 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 SLC9A3P1-201ENST00000426317 1685 ntBASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 RNF4-222ENST00000541204 2796 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 TYRO3-202ENST00000559066 3876 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 HNRNPC-202ENST00000420743 1559 ntTSL 2 BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 BCAS3-222ENST00000589222 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 TUBD1-203ENST00000346141 1490 ntTSL 2 BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 TRIOBP-204ENST00000406386 10129 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 WDR24-202ENST00000293883 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 MEG8-220ENST00000636052 1369 ntTSL 5 BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 PLAGL1-209ENST00000444202 3197 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 MADD-210ENST00000407859 5744 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 GNG11-201ENST00000248564 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 NARF-201ENST00000309794 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 THAP1-201ENST00000254250 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 TSPAN16-201ENST00000316737 1040 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 MRPL11-202ENST00000329819 922 ntTSL 2 BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 MAPT-202ENST00000334239 1107 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 AP4S1-203ENST00000334725 1122 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 RNA5SP469-201ENST00000364165 109 ntBASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 C1orf94-201ENST00000373374 2136 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 GATA1-201ENST00000376665 1140 ntTSL 5 BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 HIST1H4C-201ENST00000377803 435 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 LINC00685-201ENST00000391707 428 ntTSL 5 BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 AL353747.1-201ENST00000404577 267 ntBASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 RIPPLY1-202ENST00000411805 786 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 LINC01508-201ENST00000425666 1013 ntTSL 3 BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 AL096677.1-201ENST00000442884 814 ntTSL 3 BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 LILRB1-AS1-201ENST00000456337 554 ntTSL 4 BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 LINC02105-202ENST00000511953 870 ntTSL 3 BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 POU5F1-205ENST00000512818 1233 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 OCIAD1-226ENST00000513391 1288 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 AC084033.3-203ENST00000546580 571 ntTSL 2 BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 AC025031.2-201ENST00000550319 627 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 AC079310.1-201ENST00000552524 700 ntTSL 3 BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 BCAR1P1-201ENST00000553953 636 ntBASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 AL132780.2-203ENST00000555294 589 ntTSL 4 BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 AC032044.1-201ENST00000570924 570 ntTSL 4 BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 AP000547.3-203ENST00000591299 751 ntTSL 2 BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 ZNF551-202ENST00000596085 469 ntTSL 2 BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 FDPS-220ENST00000611010 1196 ntTSL 5 BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 AL627230.4-201ENST00000617851 370 ntBASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 NOP16-210ENST00000619979 963 ntTSL 5 BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 ABCD1-201ENST00000218104 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 MTMR3-203ENST00000351488 4464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 ZNF567-202ENST00000536254 2825 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 FAM200B-223ENST00000622362 4377 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 DLGAP2-AS1-201ENST00000518009 1810 ntTSL 2 BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 ANGEL2-208ENST00000535388 2517 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 LRTM2-202ENST00000535041 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 PTPN11-205ENST00000635625 1794 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 PLEKHG6-204ENST00000449001 3111 ntTSL 2 BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 AGO2-205ENST00000519980 3141 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 TXN2-201ENST00000216185 1736 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 PPP1R12A-203ENST00000450142 5721 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 AIPL1-203ENST00000381129 2959 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 Z97192.3-201ENST00000420902 2975 ntTSL 2 BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 NPHS1-202ENST00000378910 4276 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
NPIPA3F8WFD2 ZNF202-201ENST00000336139 4130 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 WDR47-202ENST00000361054 4115 ntTSL 5 BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 AIPL1-201ENST00000250087 2783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 CTNNBL1-203ENST00000373473 1493 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 GABPB1-206ENST00000543881 1450 ntTSL 2 BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 AC106818.1-201ENST00000623223 3242 ntBASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 TNFSF13B-202ENST00000430559 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 TXLNA-202ENST00000373610 4854 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 HSD3B1-204ENST00000528909 1436 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 RAVER1-201ENST00000293677 3595 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 NEDD1-202ENST00000411739 2490 ntTSL 2 BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 AC002550.1-201ENST00000565916 1379 ntTSL 5 BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 E2F3-203ENST00000613242 4094 ntTSL 5 BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 DAP3-225ENST00000535183 1894 ntTSL 2 BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 ALDH8A1-203ENST00000367845 2383 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 TTC30A-201ENST00000355689 5975 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 CD209-201ENST00000204801 1083 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 CD209-202ENST00000315591 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 CHCHD5-201ENST00000324913 691 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 GSTM4-202ENST00000336075 657 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 CDA-201ENST00000375071 963 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 LST1-206ENST00000376090 689 ntTSL 2 BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 LST1-210ENST00000376099 610 ntTSL 2 BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 PAGE4-202ENST00000376141 487 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 MBD3L2-201ENST00000381393 793 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 AL021068.1-201ENST00000392097 911 ntBASIC10.94□□□□□ -0.66
NPIPA3F8WFD2 LST1-214ENST00000418507 726 ntTSL 2 BASIC10.94□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms