Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC016590.1-203ENST00000590889 547 ntTSL 2 BASIC12.51□□□□□ -0.41
SLC1A1P43005 ZNF814-205ENST00000595295 909 ntTSL 2 BASIC12.51□□□□□ -0.41
SLC1A1P43005 FAM231B-201ENST00000600179 510 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
SLC1A1P43005 GMNN-207ENST00000620958 1039 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
SLC1A1P43005 AC005906.2-208ENST00000638655 1286 ntTSL 5 BASIC12.51□□□□□ -0.41
SLC1A1P43005 SMIM10L1-201ENST00000622602 4795 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
SLC1A1P43005 CLK4-215ENST00000611733 2182 ntTSL 5 BASIC12.51□□□□□ -0.41
SLC1A1P43005 RAB11FIP3-205ENST00000450428 3203 ntTSL 2 BASIC12.51□□□□□ -0.41
SLC1A1P43005 TRIM36-207ENST00000513154 4218 ntTSL 2 BASIC12.51□□□□□ -0.41
SLC1A1P43005 GOLGA3-201ENST00000204726 9252 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
SLC1A1P43005 ZCCHC9-201ENST00000254037 4606 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
SLC1A1P43005 ACP1-202ENST00000272067 1552 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SLC1A1P43005 NAGA-201ENST00000396398 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SLC1A1P43005 HMOX2-202ENST00000398595 1644 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
SLC1A1P43005 AL138787.1-201ENST00000446354 1674 ntTSL 3 BASIC12.51□□□□□ -0.41
SLC1A1P43005 ALDOC-203ENST00000395321 1722 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SLC1A1P43005 PLEKHB2-208ENST00000439822 4177 ntTSL 3 BASIC12.51□□□□□ -0.41
SLC1A1P43005 APTX-206ENST00000379825 2023 ntTSL 2 BASIC12.5□□□□□ -0.41
SLC1A1P43005 ODF2-206ENST00000393533 2086 ntTSL 2 BASIC12.5□□□□□ -0.41
SLC1A1P43005 EMG1-202ENST00000599672 4898 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SLC1A1P43005 UQCC1-201ENST00000349714 2188 ntTSL 5 BASIC12.5□□□□□ -0.41
SLC1A1P43005 DCT-201ENST00000377028 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SLC1A1P43005 ANKRD26-202ENST00000436985 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SLC1A1P43005 CHERP-203ENST00000546361 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SLC1A1P43005 MAGED1-203ENST00000375722 2806 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SLC1A1P43005 N4BP2L1-202ENST00000380130 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SLC1A1P43005 GLYR1-202ENST00000436648 3466 ntTSL 2 BASIC12.5□□□□□ -0.41
SLC1A1P43005 CCDC70-201ENST00000242819 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SLC1A1P43005 PEBP4-201ENST00000256404 895 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SLC1A1P43005 F2R-201ENST00000319211 3821 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SLC1A1P43005 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SLC1A1P43005 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SLC1A1P43005 AC074085.2-201ENST00000416734 428 ntBASIC12.5□□□□□ -0.41
SLC1A1P43005 AC010997.3-201ENST00000418818 502 ntTSL 3 BASIC12.5□□□□□ -0.41
SLC1A1P43005 MPRIP-AS1-201ENST00000428367 1058 ntTSL 3 BASIC12.5□□□□□ -0.41
SLC1A1P43005 AC069257.3-201ENST00000431391 708 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SLC1A1P43005 AC005220.1-201ENST00000450473 884 ntTSL 5 BASIC12.5□□□□□ -0.41
SLC1A1P43005 RN7SL794P-201ENST00000469816 280 ntBASIC12.5□□□□□ -0.41
SLC1A1P43005 AP005901.1-201ENST00000508721 1181 ntBASIC12.5□□□□□ -0.41
SLC1A1P43005 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC12.5□□□□□ -0.41
SLC1A1P43005 AC079905.2-201ENST00000550105 247 ntBASIC12.5□□□□□ -0.41
SLC1A1P43005 AL445363.2-201ENST00000554608 837 ntTSL 2 BASIC12.5□□□□□ -0.41
SLC1A1P43005 AC091167.3-201ENST00000561573 3838 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SLC1A1P43005 AC120498.5-201ENST00000561757 299 ntBASIC12.5□□□□□ -0.41
SLC1A1P43005 AC120057.3-201ENST00000570760 776 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
SLC1A1P43005 AC016182.1-201ENST00000587621 582 ntBASIC12.5□□□□□ -0.41
SLC1A1P43005 AC092634.5-206ENST00000593670 812 ntTSL 5 BASIC12.5□□□□□ -0.41
SLC1A1P43005 AC008013.1-201ENST00000612219 629 ntBASIC12.5□□□□□ -0.41
SLC1A1P43005 AL445363.1-201ENST00000623749 952 ntTSL 2 BASIC12.5□□□□□ -0.41
SLC1A1P43005 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC12.5□□□□□ -0.41
SLC1A1P43005 LINC00337-201ENST00000429480 1302 ntTSL 2 BASIC12.5□□□□□ -0.41
SLC1A1P43005 DPY19L2-202ENST00000324472 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SLC1A1P43005 CNKSR2-201ENST00000279451 4478 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SLC1A1P43005 LRRC18-201ENST00000374160 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SLC1A1P43005 NF1P6-201ENST00000426025 1649 ntBASIC12.5□□□□□ -0.41
SLC1A1P43005 AL645568.1-201ENST00000367716 1815 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SLC1A1P43005 DAP3-225ENST00000535183 1894 ntTSL 2 BASIC12.5□□□□□ -0.41
SLC1A1P43005 AC004554.2-201ENST00000634846 1893 ntTSL 5 BASIC12.5□□□□□ -0.41
SLC1A1P43005 BX005040.3-201ENST00000611332 1988 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SLC1A1P43005 PLEKHG2-203ENST00000425673 8132 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
SLC1A1P43005 NR1I2-201ENST00000337940 2743 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SLC1A1P43005 VTA1-203ENST00000452973 3177 ntTSL 2 BASIC12.5□□□□□ -0.41
SLC1A1P43005 AC091959.3-201ENST00000506502 3311 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SLC1A1P43005 EPHB6-202ENST00000422643 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SLC1A1P43005 OSBP2-208ENST00000437268 3580 ntTSL 2 BASIC12.5□□□□□ -0.41
SLC1A1P43005 MED29-207ENST00000615911 3565 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SLC1A1P43005 SLC6A6-204ENST00000613060 6526 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SLC1A1P43005 TFDP2-215ENST00000489671 9857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SLC1A1P43005 ARHGAP6-205ENST00000380736 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SLC1A1P43005 AGK-201ENST00000355413 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SLC1A1P43005 FP565324.1-201ENST00000636427 3659 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SLC1A1P43005 TMEM38B-202ENST00000374692 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SLC1A1P43005 DNMT3A-201ENST00000264709 9501 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SLC1A1P43005 SCN5A-202ENST00000333535 8456 ntAPPRIS P5 TSL 1 (best) BASIC12.49□□□□□ -0.41
SLC1A1P43005 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SLC1A1P43005 GOLGA8CP-201ENST00000446144 5237 ntBASIC12.49□□□□□ -0.41
SLC1A1P43005 GOLGA8F-201ENST00000526619 5237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SLC1A1P43005 ANAPC10-217ENST00000613466 1674 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
SLC1A1P43005 FP475955.3-201ENST00000623678 1612 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SLC1A1P43005 WRNIP1-201ENST00000380764 1557 ntTSL 2 BASIC12.49□□□□□ -0.41
SLC1A1P43005 PAX6-249ENST00000639034 1597 ntTSL 5 BASIC12.49□□□□□ -0.41
SLC1A1P43005 PSMD10-201ENST00000217958 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SLC1A1P43005 ANXA13-202ENST00000419625 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SLC1A1P43005 FAM90A27P-201ENST00000593323 1370 ntBASIC12.49□□□□□ -0.41
SLC1A1P43005 CEP170-204ENST00000366544 6805 ntTSL 5 BASIC12.49□□□□□ -0.41
SLC1A1P43005 LRP12-202ENST00000424843 4092 ntTSL 2 BASIC12.49□□□□□ -0.41
SLC1A1P43005 CEP85-202ENST00000451429 4061 ntTSL 2 BASIC12.49□□□□□ -0.41
SLC1A1P43005 EPB41L5-201ENST00000263713 6628 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SLC1A1P43005 NFIA-202ENST00000371184 1348 ntTSL 5 BASIC12.49□□□□□ -0.41
SLC1A1P43005 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC12.49□□□□□ -0.41
SLC1A1P43005 SLC6A3-201ENST00000270349 3936 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SLC1A1P43005 POP5-201ENST00000341039 913 ntTSL 2 BASIC12.49□□□□□ -0.41
SLC1A1P43005 TRAF3IP2-206ENST00000368735 903 ntTSL 2 BASIC12.49□□□□□ -0.41
SLC1A1P43005 ATP5G2-202ENST00000394349 878 ntTSL 2 BASIC12.49□□□□□ -0.41
SLC1A1P43005 SNRPCP15-201ENST00000424055 192 ntBASIC12.49□□□□□ -0.41
SLC1A1P43005 RAB15-202ENST00000426039 683 ntTSL 3 BASIC12.49□□□□□ -0.41
SLC1A1P43005 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC12.49□□□□□ -0.41
SLC1A1P43005 SRP9P1-201ENST00000445874 261 ntBASIC12.49□□□□□ -0.41
SLC1A1P43005 VOPP1-212ENST00000454227 610 ntTSL 4 BASIC12.49□□□□□ -0.41
SLC1A1P43005 LINC00877-202ENST00000464271 552 ntTSL 4 BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms