Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 PAX8-AS1-205ENST00000437551 2390 ntTSL 5 BASIC12.55□□□□□ -0.4
SLC1A1P43005 SPATA4-203ENST00000515234 2115 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SLC1A1P43005 CNN2-207ENST00000565096 2109 ntTSL 2 BASIC12.55□□□□□ -0.4
SLC1A1P43005 TUBB8-207ENST00000568866 1367 ntTSL 5 BASIC12.55□□□□□ -0.4
SLC1A1P43005 PPEF2-201ENST00000286719 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SLC1A1P43005 LINC02267-201ENST00000513393 1687 ntTSL 3 BASIC12.54□□□□□ -0.4
SLC1A1P43005 CENPK-215ENST00000514814 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SLC1A1P43005 TARS2-204ENST00000369064 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SLC1A1P43005 TTC23-204ENST00000394135 2496 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
SLC1A1P43005 AL355482.1-201ENST00000411509 2463 ntTSL 2 BASIC12.54□□□□□ -0.4
SLC1A1P43005 AL009178.1-201ENST00000392115 1486 ntBASIC12.54□□□□□ -0.4
SLC1A1P43005 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SLC1A1P43005 DGKA-229ENST00000551156 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SLC1A1P43005 PRY-201ENST00000303728 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SLC1A1P43005 PRY2-201ENST00000303804 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SLC1A1P43005 PRYP3-201ENST00000343584 1063 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SLC1A1P43005 TRIM15-206ENST00000376688 426 ntTSL 5 BASIC12.54□□□□□ -0.4
SLC1A1P43005 MPP3-202ENST00000398393 2996 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SLC1A1P43005 LINC01128-201ENST00000415295 894 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SLC1A1P43005 LINC01135-201ENST00000419531 996 ntTSL 4 BASIC12.54□□□□□ -0.4
SLC1A1P43005 LINC00443-201ENST00000421601 1170 ntTSL 3 BASIC12.54□□□□□ -0.4
SLC1A1P43005 EEF1DP5-201ENST00000431410 772 ntBASIC12.54□□□□□ -0.4
SLC1A1P43005 GAPDHP2-201ENST00000432206 998 ntBASIC12.54□□□□□ -0.4
SLC1A1P43005 SLC25A39P1-201ENST00000444461 1065 ntBASIC12.54□□□□□ -0.4
SLC1A1P43005 SNHG14-207ENST00000452731 1064 ntTSL 5 BASIC12.54□□□□□ -0.4
SLC1A1P43005 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SLC1A1P43005 LINC02414-201ENST00000537280 494 ntTSL 4 BASIC12.54□□□□□ -0.4
SLC1A1P43005 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC12.54□□□□□ -0.4
SLC1A1P43005 AC010478.1-203ENST00000558403 532 ntTSL 4 BASIC12.54□□□□□ -0.4
SLC1A1P43005 CD276-217ENST00000564751 951 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SLC1A1P43005 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC12.54□□□□□ -0.4
SLC1A1P43005 AL365205.3-201ENST00000593368 169 ntBASIC12.54□□□□□ -0.4
SLC1A1P43005 AL031768.1-201ENST00000606542 701 ntBASIC12.54□□□□□ -0.4
SLC1A1P43005 AC093495.1-215ENST00000626655 821 ntTSL 5 BASIC12.54□□□□□ -0.4
SLC1A1P43005 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC12.54□□□□□ -0.4
SLC1A1P43005 KLHDC2-211ENST00000557247 1565 ntTSL 5 BASIC12.54□□□□□ -0.4
SLC1A1P43005 GALNT11-208ENST00000434507 2747 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SLC1A1P43005 FAM92A-206ENST00000518322 4241 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
SLC1A1P43005 NDRG4-254ENST00000569923 1312 ntTSL 2 BASIC12.54□□□□□ -0.4
SLC1A1P43005 IKZF4-203ENST00000547167 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SLC1A1P43005 APP-201ENST00000346798 3467 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SLC1A1P43005 AC008758.4-201ENST00000435033 2593 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SLC1A1P43005 ABL1-202ENST00000372348 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SLC1A1P43005 LBHD1-204ENST00000431002 2915 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
SLC1A1P43005 HMGN3-AS1-201ENST00000604516 2946 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SLC1A1P43005 ARMCX2-203ENST00000356824 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SLC1A1P43005 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SLC1A1P43005 LYRM4-205ENST00000464010 1401 ntTSL 3 BASIC12.54□□□□□ -0.4
SLC1A1P43005 TBC1D29-202ENST00000580161 3018 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SLC1A1P43005 SMOC1-202ENST00000381280 3666 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SLC1A1P43005 COL9A1-202ENST00000357250 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SLC1A1P43005 EFHC1-219ENST00000636379 1829 ntTSL 5 BASIC12.53□□□□□ -0.4
SLC1A1P43005 CCT6P1-201ENST00000434500 1544 ntBASIC12.53□□□□□ -0.4
SLC1A1P43005 APOL3-205ENST00000397293 2214 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SLC1A1P43005 RPAP1-201ENST00000304330 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SLC1A1P43005 SLC13A3-201ENST00000279027 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SLC1A1P43005 ZFYVE27-207ENST00000423811 3045 ntAPPRIS P4 TSL 5 BASIC12.53□□□□□ -0.4
SLC1A1P43005 TP53-208ENST00000504290 2331 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SLC1A1P43005 TP53-220ENST00000610623 2331 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SLC1A1P43005 ARL6-201ENST00000335979 1630 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SLC1A1P43005 ANXA11-202ENST00000372231 6720 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SLC1A1P43005 C17orf64-201ENST00000269127 950 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SLC1A1P43005 MRPL55-210ENST00000366736 660 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
SLC1A1P43005 AC005587.1-201ENST00000401879 592 ntBASIC12.53□□□□□ -0.4
SLC1A1P43005 FTH1P19-201ENST00000402402 528 ntBASIC12.53□□□□□ -0.4
SLC1A1P43005 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
SLC1A1P43005 AC114501.1-201ENST00000445949 172 ntBASIC12.53□□□□□ -0.4
SLC1A1P43005 HS1BP3-IT1-201ENST00000449391 600 ntTSL 2 BASIC12.53□□□□□ -0.4
SLC1A1P43005 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC12.53□□□□□ -0.4
SLC1A1P43005 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC12.53□□□□□ -0.4
SLC1A1P43005 AL589666.1-201ENST00000503906 835 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SLC1A1P43005 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC12.53□□□□□ -0.4
SLC1A1P43005 AP005018.2-201ENST00000528464 822 ntBASIC12.53□□□□□ -0.4
SLC1A1P43005 TRIM29-213ENST00000529044 1233 ntTSL 2 BASIC12.53□□□□□ -0.4
SLC1A1P43005 AP003040.1-201ENST00000532044 1024 ntBASIC12.53□□□□□ -0.4
SLC1A1P43005 AC136475.6-201ENST00000533113 289 ntBASIC12.53□□□□□ -0.4
SLC1A1P43005 AP003785.1-201ENST00000544959 492 ntTSL 4 BASIC12.53□□□□□ -0.4
SLC1A1P43005 CSRP2-207ENST00000552330 910 ntTSL 3 BASIC12.53□□□□□ -0.4
SLC1A1P43005 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC12.53□□□□□ -0.4
SLC1A1P43005 LINC02352-201ENST00000557928 468 ntTSL 5 BASIC12.53□□□□□ -0.4
SLC1A1P43005 FBXO36P1-201ENST00000579006 471 ntBASIC12.53□□□□□ -0.4
SLC1A1P43005 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC12.53□□□□□ -0.4
SLC1A1P43005 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
SLC1A1P43005 ZNF438-204ENST00000413025 3106 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
SLC1A1P43005 IL1RAP-207ENST00000422485 2048 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SLC1A1P43005 ZNF683-202ENST00000403843 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SLC1A1P43005 DENND2A-209ENST00000496613 3562 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
SLC1A1P43005 APBB2-214ENST00000508593 3592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SLC1A1P43005 GTPBP2-201ENST00000307114 2830 ntTSL 2 BASIC12.53□□□□□ -0.4
SLC1A1P43005 FBP2-201ENST00000375337 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SLC1A1P43005 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SLC1A1P43005 AC099689.1-201ENST00000624383 1302 ntBASIC12.53□□□□□ -0.4
SLC1A1P43005 AL583844.1-201ENST00000424229 1724 ntBASIC12.53□□□□□ -0.4
SLC1A1P43005 LYPD6-201ENST00000334166 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SLC1A1P43005 CHRNA7-224ENST00000637183 2912 ntTSL 5 BASIC12.53□□□□□ -0.4
SLC1A1P43005 PPP1CC-204ENST00000546933 2154 ntTSL 3 BASIC12.53□□□□□ -0.4
SLC1A1P43005 PTGR2-201ENST00000267568 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SLC1A1P43005 LCTL-202ENST00000537670 2552 ntTSL 2 BASIC12.53□□□□□ -0.4
SLC1A1P43005 CYP4F3-206ENST00000591058 2983 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SLC1A1P43005 SMG7-212ENST00000507469 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms