Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 GOLGA2P5-203ENST00000397112 2632 ntTSL 2 BASIC12.57□□□□□ -0.4
SLC1A1P43005 C14orf93-201ENST00000299088 3354 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
SLC1A1P43005 SLC35A4-201ENST00000323146 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SLC1A1P43005 AL355607.2-201ENST00000563268 1395 ntTSL 5 BASIC12.56□□□□□ -0.4
SLC1A1P43005 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC12.56□□□□□ -0.4
SLC1A1P43005 YLPM1-201ENST00000325680 7108 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
SLC1A1P43005 MED24-201ENST00000356271 3446 ntTSL 2 BASIC12.56□□□□□ -0.4
SLC1A1P43005 ADAM22-201ENST00000265727 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SLC1A1P43005 ARHGEF15-201ENST00000361926 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SLC1A1P43005 AKAP1-208ENST00000572557 3098 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
SLC1A1P43005 KRT34-201ENST00000394001 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SLC1A1P43005 GLB1-203ENST00000399402 2512 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
SLC1A1P43005 FRMPD1-202ENST00000377765 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SLC1A1P43005 ARHGEF10L-203ENST00000375408 3685 ntTSL 5 BASIC12.56□□□□□ -0.4
SLC1A1P43005 LRFN3-204ENST00000588831 3689 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
SLC1A1P43005 MBP-211ENST00000397875 2168 ntTSL 5 BASIC12.56□□□□□ -0.4
SLC1A1P43005 UQCRHL-201ENST00000483273 2180 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
SLC1A1P43005 MYO10-212ENST00000515803 4839 ntTSL 2 BASIC12.56□□□□□ -0.4
SLC1A1P43005 TTC26-201ENST00000343187 2015 ntTSL 2 BASIC12.56□□□□□ -0.4
SLC1A1P43005 CASP7-204ENST00000369321 2620 ntTSL 2 BASIC12.56□□□□□ -0.4
SLC1A1P43005 HIST1H1E-201ENST00000304218 754 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
SLC1A1P43005 OR52M1-201ENST00000360213 954 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
SLC1A1P43005 MYL5-201ENST00000400159 666 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SLC1A1P43005 AL139008.1-201ENST00000437894 228 ntBASIC12.56□□□□□ -0.4
SLC1A1P43005 CDK4P1-201ENST00000454213 828 ntBASIC12.56□□□□□ -0.4
SLC1A1P43005 CTSLP1-201ENST00000457530 1002 ntBASIC12.56□□□□□ -0.4
SLC1A1P43005 AL359915.1-201ENST00000457719 898 ntTSL 2 BASIC12.56□□□□□ -0.4
SLC1A1P43005 AL354676.1-201ENST00000458047 368 ntBASIC12.56□□□□□ -0.4
SLC1A1P43005 RN7SL452P-201ENST00000482923 291 ntBASIC12.56□□□□□ -0.4
SLC1A1P43005 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SLC1A1P43005 AC087878.1-201ENST00000560709 574 ntTSL 4 BASIC12.56□□□□□ -0.4
SLC1A1P43005 KRT18P18-201ENST00000565278 1279 ntBASIC12.56□□□□□ -0.4
SLC1A1P43005 CR936218.2-201ENST00000574252 759 ntTSL 3 BASIC12.56□□□□□ -0.4
SLC1A1P43005 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC12.56□□□□□ -0.4
SLC1A1P43005 AC006273.1-201ENST00000606966 861 ntBASIC12.56□□□□□ -0.4
SLC1A1P43005 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC12.56□□□□□ -0.4
SLC1A1P43005 AC005609.1-201ENST00000625195 617 ntTSL 5 BASIC12.56□□□□□ -0.4
SLC1A1P43005 NAGA-202ENST00000402937 1869 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
SLC1A1P43005 SVEP1-201ENST00000374461 3257 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SLC1A1P43005 ZER1-201ENST00000291900 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SLC1A1P43005 USHBP1-201ENST00000252597 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SLC1A1P43005 LGALS9-203ENST00000395473 3114 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SLC1A1P43005 AC017083.4-201ENST00000406334 2306 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
SLC1A1P43005 ERP29-201ENST00000261735 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SLC1A1P43005 SMAD3-202ENST00000439724 1530 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SLC1A1P43005 CEP83-203ENST00000397809 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SLC1A1P43005 ZNF839-206ENST00000558850 2971 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
SLC1A1P43005 AARS-201ENST00000261772 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SLC1A1P43005 SLC12A4-203ENST00000537830 3525 ntTSL 2 BASIC12.55□□□□□ -0.4
SLC1A1P43005 CAPN13-201ENST00000295055 2683 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SLC1A1P43005 KCNAB2-203ENST00000352527 4165 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SLC1A1P43005 ARMT1-204ENST00000545879 2495 ntTSL 2 BASIC12.55□□□□□ -0.4
SLC1A1P43005 TMEM220-201ENST00000341871 3106 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SLC1A1P43005 SLC26A5-204ENST00000356767 1404 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SLC1A1P43005 AC111182.1-201ENST00000588701 3419 ntBASIC12.55□□□□□ -0.4
SLC1A1P43005 BICRAL-203ENST00000614467 6510 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SLC1A1P43005 EXOC5-202ENST00000413566 8513 ntTSL 5 BASIC12.55□□□□□ -0.4
SLC1A1P43005 PIGM-201ENST00000368090 4319 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
SLC1A1P43005 ALKBH8-204ENST00000417449 2114 ntAPPRIS ALT1 TSL 2 BASIC12.55□□□□□ -0.4
SLC1A1P43005 NUTM2A-201ENST00000381689 3974 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
SLC1A1P43005 RBM7-203ENST00000540163 4243 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SLC1A1P43005 AL133467.2-201ENST00000555032 1714 ntTSL 4 BASIC12.55□□□□□ -0.4
SLC1A1P43005 NIP7-201ENST00000254940 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SLC1A1P43005 TUBB8-204ENST00000564130 2438 ntTSL 5 BASIC12.55□□□□□ -0.4
SLC1A1P43005 C11orf54-215ENST00000617482 2417 ntTSL 3 BASIC12.55□□□□□ -0.4
SLC1A1P43005 DGKZ-220ENST00000532868 3118 ntTSL 2 BASIC12.55□□□□□ -0.4
SLC1A1P43005 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SLC1A1P43005 KRBOX4-203ENST00000377919 993 ntAPPRIS ALT2 TSL 3 BASIC12.55□□□□□ -0.4
SLC1A1P43005 AL133517.1-201ENST00000413412 748 ntBASIC12.55□□□□□ -0.4
SLC1A1P43005 MAS1LP1-206ENST00000419416 1047 ntBASIC12.55□□□□□ -0.4
SLC1A1P43005 PDZD9-201ENST00000424898 1260 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SLC1A1P43005 AL354714.2-201ENST00000425270 1097 ntBASIC12.55□□□□□ -0.4
SLC1A1P43005 AC023347.1-201ENST00000435352 604 ntTSL 4 BASIC12.55□□□□□ -0.4
SLC1A1P43005 HUNK-AS1-201ENST00000437109 616 ntTSL 3 BASIC12.55□□□□□ -0.4
SLC1A1P43005 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC12.55□□□□□ -0.4
SLC1A1P43005 TOMM22P3-201ENST00000498134 345 ntBASIC12.55□□□□□ -0.4
SLC1A1P43005 AC110753.1-201ENST00000505711 1022 ntBASIC12.55□□□□□ -0.4
SLC1A1P43005 AC142391.1-201ENST00000515823 1002 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SLC1A1P43005 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
SLC1A1P43005 C17orf62-206ENST00000577436 1079 ntTSL 3 BASIC12.55□□□□□ -0.4
SLC1A1P43005 KRT16P3-204ENST00000584759 681 ntTSL 5 BASIC12.55□□□□□ -0.4
SLC1A1P43005 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SLC1A1P43005 AL109983.1-201ENST00000603234 646 ntBASIC12.55□□□□□ -0.4
SLC1A1P43005 LINC02427-202ENST00000605270 1059 ntTSL 2 BASIC12.55□□□□□ -0.4
SLC1A1P43005 AC020763.2-201ENST00000623155 1255 ntBASIC12.55□□□□□ -0.4
SLC1A1P43005 DNAJB5-AS1-201ENST00000626300 749 ntTSL 3 BASIC12.55□□□□□ -0.4
SLC1A1P43005 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
SLC1A1P43005 PRDM2-204ENST00000376048 2688 ntTSL 2 BASIC12.55□□□□□ -0.4
SLC1A1P43005 ACSBG2-202ENST00000586696 2739 ntAPPRIS P3 TSL 2 BASIC12.55□□□□□ -0.4
SLC1A1P43005 SLC6A6-210ENST00000622186 6528 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SLC1A1P43005 ZNF629-201ENST00000262525 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SLC1A1P43005 ZSWIM5P2-201ENST00000420212 2038 ntBASIC12.55□□□□□ -0.4
SLC1A1P43005 UBE3B-203ENST00000434735 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SLC1A1P43005 TDRD3-201ENST00000196169 3019 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SLC1A1P43005 SLC22A14-202ENST00000448498 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SLC1A1P43005 KLC2-202ENST00000394065 3755 ntTSL 2 BASIC12.55□□□□□ -0.4
SLC1A1P43005 CCDC38-202ENST00000546386 2599 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SLC1A1P43005 CCDC148-201ENST00000283233 3122 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SLC1A1P43005 KCND3-203ENST00000369697 7396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SLC1A1P43005 ZNF805-202ENST00000414468 1884 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms