Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 HNRNPA3P3-201ENST00000416838 1137 ntBASIC12.59□□□□□ -0.39
MTHFRP42898 LINC01219-201ENST00000418612 722 ntTSL 2 BASIC12.59□□□□□ -0.39
MTHFRP42898 AL356481.1-201ENST00000434999 578 ntTSL 5 BASIC12.59□□□□□ -0.39
MTHFRP42898 AC073188.5-201ENST00000451103 673 ntTSL 2 BASIC12.59□□□□□ -0.39
MTHFRP42898 RN7SL766P-201ENST00000494719 309 ntBASIC12.59□□□□□ -0.39
MTHFRP42898 RN7SL645P-201ENST00000496148 269 ntBASIC12.59□□□□□ -0.39
MTHFRP42898 SEMA6A-AS1-205ENST00000512128 479 ntTSL 2 BASIC12.59□□□□□ -0.39
MTHFRP42898 MARCH3-205ENST00000515241 719 ntTSL 2 BASIC12.59□□□□□ -0.39
MTHFRP42898 RNA5SP520-201ENST00000516506 113 ntBASIC12.59□□□□□ -0.39
MTHFRP42898 RNA5SP523-201ENST00000516858 113 ntBASIC12.59□□□□□ -0.39
MTHFRP42898 TRIQK-213ENST00000521617 774 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
MTHFRP42898 AC109635.1-201ENST00000529200 490 ntBASIC12.59□□□□□ -0.39
MTHFRP42898 ZNF175-203ENST00000545217 1239 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
MTHFRP42898 AC134312.5-202ENST00000562705 756 ntTSL 3 BASIC12.59□□□□□ -0.39
MTHFRP42898 AC137932.1-201ENST00000563087 410 ntTSL 2 BASIC12.59□□□□□ -0.39
MTHFRP42898 AL121578.3-201ENST00000567273 710 ntTSL 3 BASIC12.59□□□□□ -0.39
MTHFRP42898 APOC1P1-204ENST00000575148 560 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
MTHFRP42898 AC003688.2-201ENST00000576271 415 ntTSL 3 BASIC12.59□□□□□ -0.39
MTHFRP42898 ZNF581-204ENST00000588537 1100 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
MTHFRP42898 AC005387.2-201ENST00000596596 440 ntTSL 3 BASIC12.59□□□□□ -0.39
MTHFRP42898 MST1R-213ENST00000612032 1065 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
MTHFRP42898 NOP16-207ENST00000614830 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
MTHFRP42898 AC004233.4-201ENST00000621689 417 ntBASIC12.59□□□□□ -0.39
MTHFRP42898 AP003062.2-201ENST00000624288 1117 ntBASIC12.59□□□□□ -0.39
MTHFRP42898 AC244517.2-204ENST00000624802 415 ntTSL 3 BASIC12.59□□□□□ -0.39
MTHFRP42898 5_8S_rRNA.4-201ENST00000636054 151 ntBASIC12.59□□□□□ -0.39
MTHFRP42898 AC007493.1-201ENST00000637635 683 ntTSL 5 BASIC12.59□□□□□ -0.39
MTHFRP42898 RBMXL3-201ENST00000424776 3442 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
MTHFRP42898 YEATS2-201ENST00000305135 6506 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
MTHFRP42898 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
MTHFRP42898 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC12.59□□□□□ -0.39
MTHFRP42898 SEC24B-AS1-202ENST00000499713 1433 ntTSL 5 BASIC12.59□□□□□ -0.39
MTHFRP42898 UBE2A-211ENST00000631185 1435 ntTSL 5 BASIC12.59□□□□□ -0.39
MTHFRP42898 TNKS-213ENST00000522110 2900 ntBASIC12.59□□□□□ -0.39
MTHFRP42898 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
MTHFRP42898 RASSF8-203ENST00000405154 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
MTHFRP42898 SEPT10-202ENST00000397712 3071 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
MTHFRP42898 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC12.59□□□□□ -0.39
MTHFRP42898 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC12.59□□□□□ -0.39
MTHFRP42898 C17orf51-201ENST00000391411 7914 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
MTHFRP42898 DGKH-202ENST00000337343 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
MTHFRP42898 ENO4-202ENST00000369207 1484 ntTSL 5 BASIC12.59□□□□□ -0.39
MTHFRP42898 MPPE1-202ENST00000317235 2324 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
MTHFRP42898 ABI1-212ENST00000490841 3188 ntTSL 2 BASIC12.59□□□□□ -0.39
MTHFRP42898 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
MTHFRP42898 GRIN2A-206ENST00000562109 4338 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
MTHFRP42898 SHMT2-205ENST00000553474 1765 ntTSL 2 BASIC12.58□□□□□ -0.39
MTHFRP42898 PLOD2-209ENST00000494950 2908 ntTSL 2 BASIC12.58□□□□□ -0.39
MTHFRP42898 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC12.58□□□□□ -0.39
MTHFRP42898 EDRF1-201ENST00000337623 4387 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.39
MTHFRP42898 NBN-203ENST00000409330 4523 ntTSL 5 BASIC12.58□□□□□ -0.39
MTHFRP42898 ATG13-211ENST00000528494 2351 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
MTHFRP42898 SLC25A25-205ENST00000432073 3678 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
MTHFRP42898 EPB41L2-205ENST00000445890 3677 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
MTHFRP42898 HLA-DOB-206ENST00000438763 1372 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
MTHFRP42898 SLC36A4-201ENST00000326402 6012 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
MTHFRP42898 RUNX2-AS1-201ENST00000563807 1513 ntTSL 5 BASIC12.58□□□□□ -0.4
MTHFRP42898 MYO19-203ENST00000610930 3271 ntTSL 5 BASIC12.58□□□□□ -0.4
MTHFRP42898 USP3-213ENST00000559711 1693 ntTSL 5 BASIC12.58□□□□□ -0.4
MTHFRP42898 ASAH2B-202ENST00000374007 3715 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
MTHFRP42898 ZNF670-201ENST00000366503 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
MTHFRP42898 ANXA8-205ENST00000585281 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
MTHFRP42898 CDC16-201ENST00000252457 2034 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
MTHFRP42898 C10orf90-201ENST00000284694 3076 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
MTHFRP42898 ETV5-201ENST00000306376 4111 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
MTHFRP42898 UQCRH-201ENST00000311672 604 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
MTHFRP42898 RBM3-201ENST00000354480 1884 ntTSL 2 BASIC12.58□□□□□ -0.4
MTHFRP42898 POLR3C-202ENST00000369294 1590 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
MTHFRP42898 CDC16-205ENST00000375308 2034 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
MTHFRP42898 ELP4-202ENST00000379163 1700 ntTSL 2 BASIC12.58□□□□□ -0.4
MTHFRP42898 WRNIP1-201ENST00000380764 1557 ntTSL 2 BASIC12.58□□□□□ -0.4
MTHFRP42898 TTC32-202ENST00000402414 735 ntTSL 5 BASIC12.58□□□□□ -0.4
MTHFRP42898 GAGE10-201ENST00000407599 538 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
MTHFRP42898 AL049795.1-202ENST00000421616 786 ntTSL 3 BASIC12.58□□□□□ -0.4
MTHFRP42898 FAM238B-202ENST00000423917 1220 ntTSL 5 BASIC12.58□□□□□ -0.4
MTHFRP42898 AL158201.1-201ENST00000426382 1248 ntBASIC12.58□□□□□ -0.4
MTHFRP42898 DLEC1P1-201ENST00000427139 576 ntBASIC12.58□□□□□ -0.4
MTHFRP42898 DDX56-204ENST00000431640 1554 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
MTHFRP42898 IP6K2-219ENST00000446860 1565 ntTSL 2 BASIC12.58□□□□□ -0.4
MTHFRP42898 PRDX2P2-201ENST00000451920 587 ntBASIC12.58□□□□□ -0.4
MTHFRP42898 PLK4-210ENST00000514379 3060 ntTSL 2 BASIC12.58□□□□□ -0.4
MTHFRP42898 MEG3-223ENST00000524131 721 ntTSL 5 BASIC12.58□□□□□ -0.4
MTHFRP42898 VAMP1-204ENST00000535180 747 ntTSL 3 BASIC12.58□□□□□ -0.4
MTHFRP42898 C12orf54-203ENST00000548364 685 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
MTHFRP42898 RN7SL488P-201ENST00000585186 286 ntBASIC12.58□□□□□ -0.4
MTHFRP42898 ANKRD20A2-203ENST00000611747 520 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
MTHFRP42898 PPP6R2-209ENST00000612753 4104 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
MTHFRP42898 ANKRD20A4-203ENST00000615302 520 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
MTHFRP42898 CU633906.3-201ENST00000623377 741 ntBASIC12.58□□□□□ -0.4
MTHFRP42898 ETV7-208ENST00000627426 1285 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
MTHFRP42898 FAM238C-201ENST00000638416 868 ntTSL 2 BASIC12.58□□□□□ -0.4
MTHFRP42898 LRRC8E-201ENST00000306708 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
MTHFRP42898 POFUT2-213ENST00000612472 2959 ntTSL 5 BASIC12.58□□□□□ -0.4
MTHFRP42898 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
MTHFRP42898 TXNDC2-202ENST00000357775 2830 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
MTHFRP42898 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC12.58□□□□□ -0.4
MTHFRP42898 RHOH-221ENST00000615577 2227 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
MTHFRP42898 RHOH-223ENST00000619474 2230 ntAPPRIS P1 TSL 4 BASIC12.58□□□□□ -0.4
MTHFRP42898 HIST1H2BH-201ENST00000619466 2060 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
MTHFRP42898 LINC00222-207ENST00000448744 1751 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms