Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CSNK1G3Q9Y6M4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.11■□□□□ 0.97
CSNK1G3Q9Y6M4 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.11■□□□□ 0.97
CSNK1G3Q9Y6M4 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CSNK1G3Q9Y6M4 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CSNK1G3Q9Y6M4 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CSNK1G3Q9Y6M4 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CSNK1G3Q9Y6M4 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CSNK1G3Q9Y6M4 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CSNK1G3Q9Y6M4 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CSNK1G3Q9Y6M4 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.1■□□□□ 0.97
CSNK1G3Q9Y6M4 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CSNK1G3Q9Y6M4 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CSNK1G3Q9Y6M4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CSNK1G3Q9Y6M4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.1■□□□□ 0.97
CSNK1G3Q9Y6M4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CSNK1G3Q9Y6M4 AC006970.2-201ENST00000450065 779 ntBASIC21.1■□□□□ 0.97
CSNK1G3Q9Y6M4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CSNK1G3Q9Y6M4 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.1■□□□□ 0.97
CSNK1G3Q9Y6M4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.1■□□□□ 0.97
CSNK1G3Q9Y6M4 AC104187.1-201ENST00000607510 612 ntBASIC21.1■□□□□ 0.97
CSNK1G3Q9Y6M4 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CSNK1G3Q9Y6M4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CSNK1G3Q9Y6M4 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.1■□□□□ 0.97
CSNK1G3Q9Y6M4 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CSNK1G3Q9Y6M4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.1■□□□□ 0.97
CSNK1G3Q9Y6M4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CSNK1G3Q9Y6M4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CSNK1G3Q9Y6M4 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CSNK1G3Q9Y6M4 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
CSNK1G3Q9Y6M4 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
CSNK1G3Q9Y6M4 CROCCP5-201ENST00000436658 830 ntBASIC21.09■□□□□ 0.97
CSNK1G3Q9Y6M4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.09■□□□□ 0.97
CSNK1G3Q9Y6M4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CSNK1G3Q9Y6M4 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.09■□□□□ 0.97
CSNK1G3Q9Y6M4 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CSNK1G3Q9Y6M4 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CSNK1G3Q9Y6M4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CSNK1G3Q9Y6M4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.08■□□□□ 0.97
CSNK1G3Q9Y6M4 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CSNK1G3Q9Y6M4 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CSNK1G3Q9Y6M4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CSNK1G3Q9Y6M4 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CSNK1G3Q9Y6M4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CSNK1G3Q9Y6M4 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.08■□□□□ 0.97
CSNK1G3Q9Y6M4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.08■□□□□ 0.97
CSNK1G3Q9Y6M4 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CSNK1G3Q9Y6M4 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CSNK1G3Q9Y6M4 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.08■□□□□ 0.96
CSNK1G3Q9Y6M4 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CSNK1G3Q9Y6M4 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CSNK1G3Q9Y6M4 LINC01960-201ENST00000563759 1884 ntBASIC21.07■□□□□ 0.96
CSNK1G3Q9Y6M4 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CSNK1G3Q9Y6M4 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CSNK1G3Q9Y6M4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CSNK1G3Q9Y6M4 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CSNK1G3Q9Y6M4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CSNK1G3Q9Y6M4 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CSNK1G3Q9Y6M4 NCF1B-203ENST00000435988 1254 ntBASIC21.07■□□□□ 0.96
CSNK1G3Q9Y6M4 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.07■□□□□ 0.96
CSNK1G3Q9Y6M4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.07■□□□□ 0.96
CSNK1G3Q9Y6M4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.07■□□□□ 0.96
CSNK1G3Q9Y6M4 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CSNK1G3Q9Y6M4 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CSNK1G3Q9Y6M4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CSNK1G3Q9Y6M4 AC055733.4-201ENST00000638462 1354 ntBASIC21.07■□□□□ 0.96
CSNK1G3Q9Y6M4 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CSNK1G3Q9Y6M4 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CSNK1G3Q9Y6M4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CSNK1G3Q9Y6M4 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CSNK1G3Q9Y6M4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CSNK1G3Q9Y6M4 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.06■□□□□ 0.96
CSNK1G3Q9Y6M4 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.06■□□□□ 0.96
CSNK1G3Q9Y6M4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.06■□□□□ 0.96
CSNK1G3Q9Y6M4 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.06■□□□□ 0.96
CSNK1G3Q9Y6M4 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.06■□□□□ 0.96
CSNK1G3Q9Y6M4 MFSD11-216ENST00000590393 1141 ntBASIC21.06■□□□□ 0.96
CSNK1G3Q9Y6M4 AC104771.1-201ENST00000603335 964 ntBASIC21.06■□□□□ 0.96
CSNK1G3Q9Y6M4 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CSNK1G3Q9Y6M4 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CSNK1G3Q9Y6M4 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CSNK1G3Q9Y6M4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CSNK1G3Q9Y6M4 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.05■□□□□ 0.96
CSNK1G3Q9Y6M4 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CSNK1G3Q9Y6M4 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.05■□□□□ 0.96
CSNK1G3Q9Y6M4 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.05■□□□□ 0.96
CSNK1G3Q9Y6M4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.05■□□□□ 0.96
CSNK1G3Q9Y6M4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.05■□□□□ 0.96
CSNK1G3Q9Y6M4 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.05■□□□□ 0.96
CSNK1G3Q9Y6M4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CSNK1G3Q9Y6M4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CSNK1G3Q9Y6M4 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.05■□□□□ 0.96
CSNK1G3Q9Y6M4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.05■□□□□ 0.96
CSNK1G3Q9Y6M4 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.05■□□□□ 0.96
CSNK1G3Q9Y6M4 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
CSNK1G3Q9Y6M4 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSNK1G3Q9Y6M4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSNK1G3Q9Y6M4 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSNK1G3Q9Y6M4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CSNK1G3Q9Y6M4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms