Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
RAI2Q9Y5P3 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAI2Q9Y5P3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAI2Q9Y5P3 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.79■■□□□ 1.08
RAI2Q9Y5P3 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RAI2Q9Y5P3 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAI2Q9Y5P3 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.79■■□□□ 1.08
RAI2Q9Y5P3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAI2Q9Y5P3 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
RAI2Q9Y5P3 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAI2Q9Y5P3 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RAI2Q9Y5P3 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAI2Q9Y5P3 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.78■■□□□ 1.08
RAI2Q9Y5P3 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RAI2Q9Y5P3 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RAI2Q9Y5P3 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAI2Q9Y5P3 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.78■■□□□ 1.08
RAI2Q9Y5P3 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RAI2Q9Y5P3 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.78■■□□□ 1.08
RAI2Q9Y5P3 MIR6084-201ENST00000622012 110 ntBASIC21.78■■□□□ 1.08
RAI2Q9Y5P3 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.78■■□□□ 1.08
RAI2Q9Y5P3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAI2Q9Y5P3 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAI2Q9Y5P3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.78■■□□□ 1.08
RAI2Q9Y5P3 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAI2Q9Y5P3 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RAI2Q9Y5P3 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.77■■□□□ 1.08
RAI2Q9Y5P3 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
RAI2Q9Y5P3 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.77■■□□□ 1.08
RAI2Q9Y5P3 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RAI2Q9Y5P3 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RAI2Q9Y5P3 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
RAI2Q9Y5P3 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
RAI2Q9Y5P3 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.77■■□□□ 1.08
RAI2Q9Y5P3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
RAI2Q9Y5P3 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
RAI2Q9Y5P3 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.77■■□□□ 1.08
RAI2Q9Y5P3 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.77■■□□□ 1.08
RAI2Q9Y5P3 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RAI2Q9Y5P3 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.77■■□□□ 1.08
RAI2Q9Y5P3 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.77■■□□□ 1.08
RAI2Q9Y5P3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
RAI2Q9Y5P3 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RAI2Q9Y5P3 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RAI2Q9Y5P3 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.77■■□□□ 1.08
RAI2Q9Y5P3 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RAI2Q9Y5P3 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RAI2Q9Y5P3 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.77■■□□□ 1.08
RAI2Q9Y5P3 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
RAI2Q9Y5P3 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAI2Q9Y5P3 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAI2Q9Y5P3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAI2Q9Y5P3 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAI2Q9Y5P3 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.76■■□□□ 1.07
RAI2Q9Y5P3 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RAI2Q9Y5P3 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.76■■□□□ 1.07
RAI2Q9Y5P3 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.76■■□□□ 1.07
RAI2Q9Y5P3 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAI2Q9Y5P3 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
RAI2Q9Y5P3 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
RAI2Q9Y5P3 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAI2Q9Y5P3 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAI2Q9Y5P3 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.75■■□□□ 1.07
RAI2Q9Y5P3 AP004607.7-201ENST00000527152 1677 ntBASIC21.75■■□□□ 1.07
RAI2Q9Y5P3 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RAI2Q9Y5P3 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.75■■□□□ 1.07
RAI2Q9Y5P3 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
RAI2Q9Y5P3 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.75■■□□□ 1.07
RAI2Q9Y5P3 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RAI2Q9Y5P3 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.75■■□□□ 1.07
RAI2Q9Y5P3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.75■■□□□ 1.07
RAI2Q9Y5P3 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RAI2Q9Y5P3 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.75■■□□□ 1.07
RAI2Q9Y5P3 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.75■■□□□ 1.07
RAI2Q9Y5P3 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RAI2Q9Y5P3 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RAI2Q9Y5P3 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RAI2Q9Y5P3 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RAI2Q9Y5P3 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RAI2Q9Y5P3 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RAI2Q9Y5P3 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAI2Q9Y5P3 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAI2Q9Y5P3 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RAI2Q9Y5P3 AC092053.2-201ENST00000640557 1818 ntBASIC21.74■■□□□ 1.07
RAI2Q9Y5P3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAI2Q9Y5P3 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAI2Q9Y5P3 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.74■■□□□ 1.07
RAI2Q9Y5P3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RAI2Q9Y5P3 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAI2Q9Y5P3 ID1-201ENST00000376105 1233 ntBASIC21.74■■□□□ 1.07
RAI2Q9Y5P3 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAI2Q9Y5P3 AC034268.1-201ENST00000441047 882 ntBASIC21.74■■□□□ 1.07
RAI2Q9Y5P3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.74■■□□□ 1.07
RAI2Q9Y5P3 AC092437.1-201ENST00000624794 1048 ntBASIC21.74■■□□□ 1.07
RAI2Q9Y5P3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.74■■□□□ 1.07
RAI2Q9Y5P3 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAI2Q9Y5P3 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.74■■□□□ 1.07
RAI2Q9Y5P3 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAI2Q9Y5P3 BX005040.4-201ENST00000637145 1518 ntBASIC21.74■■□□□ 1.07
RAI2Q9Y5P3 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms