Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.37■□□□□ 0.85
PCDHGB3Q9Y5G1 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGB3Q9Y5G1 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGB3Q9Y5G1 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
PCDHGB3Q9Y5G1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGB3Q9Y5G1 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.37■□□□□ 0.85
PCDHGB3Q9Y5G1 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
PCDHGB3Q9Y5G1 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGB3Q9Y5G1 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDHGB3Q9Y5G1 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
PCDHGB3Q9Y5G1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDHGB3Q9Y5G1 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGB3Q9Y5G1 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGB3Q9Y5G1 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGB3Q9Y5G1 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGB3Q9Y5G1 AC006455.2-201ENST00000429931 906 ntBASIC20.36■□□□□ 0.85
PCDHGB3Q9Y5G1 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDHGB3Q9Y5G1 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGB3Q9Y5G1 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.36■□□□□ 0.85
PCDHGB3Q9Y5G1 AC011298.3-201ENST00000615796 283 ntBASIC20.36■□□□□ 0.85
PCDHGB3Q9Y5G1 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGB3Q9Y5G1 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
PCDHGB3Q9Y5G1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
PCDHGB3Q9Y5G1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
PCDHGB3Q9Y5G1 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
PCDHGB3Q9Y5G1 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGB3Q9Y5G1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGB3Q9Y5G1 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGB3Q9Y5G1 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGB3Q9Y5G1 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGB3Q9Y5G1 MIR3181-201ENST00000578512 73 ntBASIC20.35■□□□□ 0.85
PCDHGB3Q9Y5G1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.35■□□□□ 0.85
PCDHGB3Q9Y5G1 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.35■□□□□ 0.85
PCDHGB3Q9Y5G1 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGB3Q9Y5G1 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGB3Q9Y5G1 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGB3Q9Y5G1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
PCDHGB3Q9Y5G1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGB3Q9Y5G1 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGB3Q9Y5G1 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.34■□□□□ 0.85
PCDHGB3Q9Y5G1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHGB3Q9Y5G1 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHGB3Q9Y5G1 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.34■□□□□ 0.85
PCDHGB3Q9Y5G1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
PCDHGB3Q9Y5G1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGB3Q9Y5G1 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
PCDHGB3Q9Y5G1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGB3Q9Y5G1 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.34■□□□□ 0.85
PCDHGB3Q9Y5G1 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
PCDHGB3Q9Y5G1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.33■□□□□ 0.85
PCDHGB3Q9Y5G1 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGB3Q9Y5G1 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
PCDHGB3Q9Y5G1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.33■□□□□ 0.85
PCDHGB3Q9Y5G1 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGB3Q9Y5G1 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGB3Q9Y5G1 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGB3Q9Y5G1 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
PCDHGB3Q9Y5G1 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGB3Q9Y5G1 CA15P2-201ENST00000611168 834 ntBASIC20.33■□□□□ 0.85
PCDHGB3Q9Y5G1 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.33■□□□□ 0.85
PCDHGB3Q9Y5G1 AC068587.7-201ENST00000641602 218 ntBASIC20.33■□□□□ 0.85
PCDHGB3Q9Y5G1 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
PCDHGB3Q9Y5G1 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHGB3Q9Y5G1 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.33■□□□□ 0.84
PCDHGB3Q9Y5G1 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHGB3Q9Y5G1 AC026310.3-201ENST00000625186 2373 ntBASIC20.32■□□□□ 0.84
PCDHGB3Q9Y5G1 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
PCDHGB3Q9Y5G1 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGB3Q9Y5G1 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGB3Q9Y5G1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDHGB3Q9Y5G1 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGB3Q9Y5G1 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGB3Q9Y5G1 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGB3Q9Y5G1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGB3Q9Y5G1 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.32■□□□□ 0.84
PCDHGB3Q9Y5G1 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGB3Q9Y5G1 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
PCDHGB3Q9Y5G1 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGB3Q9Y5G1 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PCDHGB3Q9Y5G1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.31■□□□□ 0.84
PCDHGB3Q9Y5G1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGB3Q9Y5G1 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGB3Q9Y5G1 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDHGB3Q9Y5G1 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PCDHGB3Q9Y5G1 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.31■□□□□ 0.84
PCDHGB3Q9Y5G1 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGB3Q9Y5G1 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PCDHGB3Q9Y5G1 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGB3Q9Y5G1 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGB3Q9Y5G1 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHGB3Q9Y5G1 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGB3Q9Y5G1 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGB3Q9Y5G1 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PCDHGB3Q9Y5G1 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHGB3Q9Y5G1 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGB3Q9Y5G1 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGB3Q9Y5G1 SERBP1P1-201ENST00000396021 1160 ntBASIC20.3■□□□□ 0.84
PCDHGB3Q9Y5G1 MIR939-201ENST00000401314 82 ntBASIC20.3■□□□□ 0.84
PCDHGB3Q9Y5G1 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHGB3Q9Y5G1 AL136967.2-201ENST00000623968 743 ntBASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms