Protein–RNA interactions for Protein: Q9Y4C0

NRXN3, Neurexin-3, humanhuman

Predictions only

Length 1,643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN3Q9Y4C0 PHB2-213ENST00000546111 858 ntTSL 2 BASIC30.65■■■□□ 2.5
NRXN3Q9Y4C0 PLLP-204ENST00000569059 665 ntTSL 3 BASIC30.65■■■□□ 2.5
NRXN3Q9Y4C0 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC30.65■■■□□ 2.5
NRXN3Q9Y4C0 AC083880.1-201ENST00000608266 535 ntBASIC30.65■■■□□ 2.5
NRXN3Q9Y4C0 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC30.65■■■□□ 2.5
NRXN3Q9Y4C0 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
NRXN3Q9Y4C0 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
NRXN3Q9Y4C0 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
NRXN3Q9Y4C0 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC30.65■■■□□ 2.5
NRXN3Q9Y4C0 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
NRXN3Q9Y4C0 LINC01960-201ENST00000563759 1884 ntBASIC30.65■■■□□ 2.5
NRXN3Q9Y4C0 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
NRXN3Q9Y4C0 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
NRXN3Q9Y4C0 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC30.64■■■□□ 2.5
NRXN3Q9Y4C0 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
NRXN3Q9Y4C0 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
NRXN3Q9Y4C0 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
NRXN3Q9Y4C0 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC30.64■■■□□ 2.5
NRXN3Q9Y4C0 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
NRXN3Q9Y4C0 NAA20-201ENST00000310450 920 ntTSL 2 BASIC30.64■■■□□ 2.5
NRXN3Q9Y4C0 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
NRXN3Q9Y4C0 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC30.64■■■□□ 2.5
NRXN3Q9Y4C0 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC30.64■■■□□ 2.5
NRXN3Q9Y4C0 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC30.64■■■□□ 2.5
NRXN3Q9Y4C0 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC30.63■■■□□ 2.49
NRXN3Q9Y4C0 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
NRXN3Q9Y4C0 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC30.63■■■□□ 2.49
NRXN3Q9Y4C0 SLC7A5P1-201ENST00000568957 537 ntBASIC30.63■■■□□ 2.49
NRXN3Q9Y4C0 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC30.63■■■□□ 2.49
NRXN3Q9Y4C0 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC30.63■■■□□ 2.49
NRXN3Q9Y4C0 AC092068.2-201ENST00000590491 1708 ntBASIC30.62■■■□□ 2.49
NRXN3Q9Y4C0 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC30.62■■■□□ 2.49
NRXN3Q9Y4C0 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
NRXN3Q9Y4C0 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
NRXN3Q9Y4C0 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC30.62■■■□□ 2.49
NRXN3Q9Y4C0 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC30.62■■■□□ 2.49
NRXN3Q9Y4C0 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC30.62■■■□□ 2.49
NRXN3Q9Y4C0 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC30.62■■■□□ 2.49
NRXN3Q9Y4C0 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
NRXN3Q9Y4C0 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC30.61■■■□□ 2.49
NRXN3Q9Y4C0 AP006587.3-201ENST00000525742 1516 ntBASIC30.61■■■□□ 2.49
NRXN3Q9Y4C0 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC30.61■■■□□ 2.49
NRXN3Q9Y4C0 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC30.61■■■□□ 2.49
NRXN3Q9Y4C0 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC30.61■■■□□ 2.49
NRXN3Q9Y4C0 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC30.6■■■□□ 2.49
NRXN3Q9Y4C0 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC30.6■■■□□ 2.49
NRXN3Q9Y4C0 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC30.6■■■□□ 2.49
NRXN3Q9Y4C0 PREB-202ENST00000406567 1910 ntTSL 5 BASIC30.6■■■□□ 2.49
NRXN3Q9Y4C0 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC30.59■■■□□ 2.49
NRXN3Q9Y4C0 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
NRXN3Q9Y4C0 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC30.59■■■□□ 2.49
NRXN3Q9Y4C0 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC30.59■■■□□ 2.49
NRXN3Q9Y4C0 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
NRXN3Q9Y4C0 PRORSD1P-201ENST00000295112 541 ntBASIC30.58■■■□□ 2.49
NRXN3Q9Y4C0 RPS2P52-201ENST00000469610 820 ntBASIC30.58■■■□□ 2.49
NRXN3Q9Y4C0 AC079089.2-201ENST00000531211 1277 ntBASIC30.58■■■□□ 2.49
NRXN3Q9Y4C0 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC30.58■■■□□ 2.49
NRXN3Q9Y4C0 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
NRXN3Q9Y4C0 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC30.58■■■□□ 2.49
NRXN3Q9Y4C0 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
NRXN3Q9Y4C0 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC30.58■■■□□ 2.49
NRXN3Q9Y4C0 PPP1R14BP2-201ENST00000426284 444 ntBASIC30.58■■■□□ 2.49
NRXN3Q9Y4C0 AC093787.1-201ENST00000450396 207 ntBASIC30.58■■■□□ 2.49
NRXN3Q9Y4C0 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
NRXN3Q9Y4C0 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC30.58■■■□□ 2.49
NRXN3Q9Y4C0 RARRES2P4-201ENST00000514074 484 ntBASIC30.58■■■□□ 2.49
NRXN3Q9Y4C0 RNA5SP413-201ENST00000516373 109 ntBASIC30.58■■■□□ 2.49
NRXN3Q9Y4C0 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC30.58■■■□□ 2.49
NRXN3Q9Y4C0 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC30.58■■■□□ 2.49
NRXN3Q9Y4C0 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC30.58■■■□□ 2.49
NRXN3Q9Y4C0 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
NRXN3Q9Y4C0 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC30.57■■■□□ 2.48
NRXN3Q9Y4C0 MKRN4P-201ENST00000444706 1521 ntBASIC30.57■■■□□ 2.48
NRXN3Q9Y4C0 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC30.57■■■□□ 2.48
NRXN3Q9Y4C0 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
NRXN3Q9Y4C0 FAM201B-201ENST00000458407 597 ntBASIC30.57■■■□□ 2.48
NRXN3Q9Y4C0 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC30.57■■■□□ 2.48
NRXN3Q9Y4C0 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC30.57■■■□□ 2.48
NRXN3Q9Y4C0 MYC-209ENST00000641252 345 ntBASIC30.57■■■□□ 2.48
NRXN3Q9Y4C0 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
NRXN3Q9Y4C0 AP004607.7-201ENST00000527152 1677 ntBASIC30.57■■■□□ 2.48
NRXN3Q9Y4C0 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC30.57■■■□□ 2.48
NRXN3Q9Y4C0 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
NRXN3Q9Y4C0 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
NRXN3Q9Y4C0 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
NRXN3Q9Y4C0 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC30.56■■■□□ 2.48
NRXN3Q9Y4C0 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
NRXN3Q9Y4C0 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC30.56■■■□□ 2.48
NRXN3Q9Y4C0 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC30.56■■■□□ 2.48
NRXN3Q9Y4C0 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
NRXN3Q9Y4C0 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC30.56■■■□□ 2.48
NRXN3Q9Y4C0 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC30.55■■■□□ 2.48
NRXN3Q9Y4C0 MIPEPP3-201ENST00000412105 444 ntBASIC30.55■■■□□ 2.48
NRXN3Q9Y4C0 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC30.55■■■□□ 2.48
NRXN3Q9Y4C0 AC016405.3-201ENST00000607710 860 ntBASIC30.55■■■□□ 2.48
NRXN3Q9Y4C0 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC30.55■■■□□ 2.48
NRXN3Q9Y4C0 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC30.55■■■□□ 2.48
NRXN3Q9Y4C0 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
NRXN3Q9Y4C0 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC30.55■■■□□ 2.48
NRXN3Q9Y4C0 FXN-202ENST00000396364 980 ntTSL 5 BASIC30.55■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms