Protein–RNA interactions for Protein: Q9Y3B2

EXOSC1, Exosome complex component CSL4, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1Q9Y3B2 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
EXOSC1Q9Y3B2 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.25■□□□□ 0.67
EXOSC1Q9Y3B2 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.25■□□□□ 0.67
EXOSC1Q9Y3B2 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EXOSC1Q9Y3B2 AC104564.3-201ENST00000582367 638 ntBASIC19.25■□□□□ 0.67
EXOSC1Q9Y3B2 MIR4508-201ENST00000584178 70 ntBASIC19.25■□□□□ 0.67
EXOSC1Q9Y3B2 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EXOSC1Q9Y3B2 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EXOSC1Q9Y3B2 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EXOSC1Q9Y3B2 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
EXOSC1Q9Y3B2 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
EXOSC1Q9Y3B2 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
EXOSC1Q9Y3B2 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.24■□□□□ 0.67
EXOSC1Q9Y3B2 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.24■□□□□ 0.67
EXOSC1Q9Y3B2 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
EXOSC1Q9Y3B2 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EXOSC1Q9Y3B2 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EXOSC1Q9Y3B2 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EXOSC1Q9Y3B2 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
EXOSC1Q9Y3B2 NTF6A-201ENST00000591175 560 ntBASIC19.24■□□□□ 0.67
EXOSC1Q9Y3B2 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.24■□□□□ 0.67
EXOSC1Q9Y3B2 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
EXOSC1Q9Y3B2 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.24■□□□□ 0.67
EXOSC1Q9Y3B2 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EXOSC1Q9Y3B2 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EXOSC1Q9Y3B2 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
EXOSC1Q9Y3B2 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EXOSC1Q9Y3B2 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.23■□□□□ 0.67
EXOSC1Q9Y3B2 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.23■□□□□ 0.67
EXOSC1Q9Y3B2 AC137630.3-201ENST00000607245 391 ntBASIC19.23■□□□□ 0.67
EXOSC1Q9Y3B2 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.23■□□□□ 0.67
EXOSC1Q9Y3B2 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EXOSC1Q9Y3B2 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
EXOSC1Q9Y3B2 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EXOSC1Q9Y3B2 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.23■□□□□ 0.67
EXOSC1Q9Y3B2 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
EXOSC1Q9Y3B2 AL157384.1-201ENST00000445995 2473 ntBASIC19.23■□□□□ 0.67
EXOSC1Q9Y3B2 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EXOSC1Q9Y3B2 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
EXOSC1Q9Y3B2 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.22■□□□□ 0.67
EXOSC1Q9Y3B2 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EXOSC1Q9Y3B2 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.22■□□□□ 0.67
EXOSC1Q9Y3B2 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EXOSC1Q9Y3B2 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
EXOSC1Q9Y3B2 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
EXOSC1Q9Y3B2 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EXOSC1Q9Y3B2 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.22■□□□□ 0.67
EXOSC1Q9Y3B2 ATP5G2P3-201ENST00000429083 425 ntBASIC19.22■□□□□ 0.67
EXOSC1Q9Y3B2 HSD17B1P1-201ENST00000590052 955 ntBASIC19.22■□□□□ 0.67
EXOSC1Q9Y3B2 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
EXOSC1Q9Y3B2 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EXOSC1Q9Y3B2 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EXOSC1Q9Y3B2 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EXOSC1Q9Y3B2 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
EXOSC1Q9Y3B2 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
EXOSC1Q9Y3B2 AL121603.2-201ENST00000557373 2117 ntBASIC19.21■□□□□ 0.67
EXOSC1Q9Y3B2 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
EXOSC1Q9Y3B2 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EXOSC1Q9Y3B2 AC004987.1-201ENST00000428627 508 ntBASIC19.21■□□□□ 0.67
EXOSC1Q9Y3B2 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EXOSC1Q9Y3B2 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.21■□□□□ 0.67
EXOSC1Q9Y3B2 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.21■□□□□ 0.67
EXOSC1Q9Y3B2 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.21■□□□□ 0.67
EXOSC1Q9Y3B2 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.21■□□□□ 0.67
EXOSC1Q9Y3B2 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EXOSC1Q9Y3B2 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EXOSC1Q9Y3B2 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.21■□□□□ 0.67
EXOSC1Q9Y3B2 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.66
EXOSC1Q9Y3B2 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.2■□□□□ 0.66
EXOSC1Q9Y3B2 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
EXOSC1Q9Y3B2 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EXOSC1Q9Y3B2 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EXOSC1Q9Y3B2 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.2■□□□□ 0.66
EXOSC1Q9Y3B2 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EXOSC1Q9Y3B2 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
EXOSC1Q9Y3B2 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EXOSC1Q9Y3B2 ABHD17AP5-201ENST00000580133 923 ntBASIC19.2■□□□□ 0.66
EXOSC1Q9Y3B2 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
EXOSC1Q9Y3B2 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
EXOSC1Q9Y3B2 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EXOSC1Q9Y3B2 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
EXOSC1Q9Y3B2 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EXOSC1Q9Y3B2 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.2■□□□□ 0.66
EXOSC1Q9Y3B2 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
EXOSC1Q9Y3B2 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EXOSC1Q9Y3B2 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EXOSC1Q9Y3B2 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
EXOSC1Q9Y3B2 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
EXOSC1Q9Y3B2 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EXOSC1Q9Y3B2 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
EXOSC1Q9Y3B2 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.19■□□□□ 0.66
EXOSC1Q9Y3B2 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EXOSC1Q9Y3B2 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EXOSC1Q9Y3B2 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EXOSC1Q9Y3B2 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.19■□□□□ 0.66
EXOSC1Q9Y3B2 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
EXOSC1Q9Y3B2 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EXOSC1Q9Y3B2 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EXOSC1Q9Y3B2 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.19■□□□□ 0.66
EXOSC1Q9Y3B2 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms