Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RPH3AQ9Y2J0 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RPH3AQ9Y2J0 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RPH3AQ9Y2J0 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPH3AQ9Y2J0 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPH3AQ9Y2J0 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RPH3AQ9Y2J0 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RPH3AQ9Y2J0 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
RPH3AQ9Y2J0 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPH3AQ9Y2J0 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPH3AQ9Y2J0 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPH3AQ9Y2J0 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPH3AQ9Y2J0 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RPH3AQ9Y2J0 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RPH3AQ9Y2J0 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
RPH3AQ9Y2J0 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPH3AQ9Y2J0 AC127496.7-201ENST00000625110 1798 ntBASIC19.66■□□□□ 0.74
RPH3AQ9Y2J0 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPH3AQ9Y2J0 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPH3AQ9Y2J0 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.66■□□□□ 0.74
RPH3AQ9Y2J0 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
RPH3AQ9Y2J0 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPH3AQ9Y2J0 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPH3AQ9Y2J0 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPH3AQ9Y2J0 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.65■□□□□ 0.74
RPH3AQ9Y2J0 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RPH3AQ9Y2J0 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPH3AQ9Y2J0 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RPH3AQ9Y2J0 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.65■□□□□ 0.74
RPH3AQ9Y2J0 AC079089.2-201ENST00000531211 1277 ntBASIC19.65■□□□□ 0.74
RPH3AQ9Y2J0 SMUG1P1-201ENST00000590640 811 ntBASIC19.65■□□□□ 0.74
RPH3AQ9Y2J0 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.65■□□□□ 0.74
RPH3AQ9Y2J0 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.65■□□□□ 0.74
RPH3AQ9Y2J0 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.65■□□□□ 0.74
RPH3AQ9Y2J0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RPH3AQ9Y2J0 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RPH3AQ9Y2J0 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPH3AQ9Y2J0 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.65■□□□□ 0.74
RPH3AQ9Y2J0 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPH3AQ9Y2J0 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RPH3AQ9Y2J0 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
RPH3AQ9Y2J0 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RPH3AQ9Y2J0 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPH3AQ9Y2J0 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
RPH3AQ9Y2J0 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.64■□□□□ 0.73
RPH3AQ9Y2J0 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.64■□□□□ 0.73
RPH3AQ9Y2J0 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RPH3AQ9Y2J0 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.64■□□□□ 0.73
RPH3AQ9Y2J0 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RPH3AQ9Y2J0 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.64■□□□□ 0.73
RPH3AQ9Y2J0 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RPH3AQ9Y2J0 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RPH3AQ9Y2J0 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
RPH3AQ9Y2J0 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.64■□□□□ 0.73
RPH3AQ9Y2J0 AC079834.2-201ENST00000609776 1949 ntBASIC19.64■□□□□ 0.73
RPH3AQ9Y2J0 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.64■□□□□ 0.73
RPH3AQ9Y2J0 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPH3AQ9Y2J0 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.64■□□□□ 0.73
RPH3AQ9Y2J0 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPH3AQ9Y2J0 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPH3AQ9Y2J0 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPH3AQ9Y2J0 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPH3AQ9Y2J0 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPH3AQ9Y2J0 GUSBP5-202ENST00000510805 1989 ntBASIC19.63■□□□□ 0.73
RPH3AQ9Y2J0 AC137767.1-201ENST00000602918 1920 ntBASIC19.63■□□□□ 0.73
RPH3AQ9Y2J0 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RPH3AQ9Y2J0 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
RPH3AQ9Y2J0 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPH3AQ9Y2J0 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
RPH3AQ9Y2J0 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RPH3AQ9Y2J0 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RPH3AQ9Y2J0 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RPH3AQ9Y2J0 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.63■□□□□ 0.73
RPH3AQ9Y2J0 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.63■□□□□ 0.73
RPH3AQ9Y2J0 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RPH3AQ9Y2J0 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPH3AQ9Y2J0 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RPH3AQ9Y2J0 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RPH3AQ9Y2J0 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPH3AQ9Y2J0 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPH3AQ9Y2J0 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RPH3AQ9Y2J0 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPH3AQ9Y2J0 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.62■□□□□ 0.73
RPH3AQ9Y2J0 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RPH3AQ9Y2J0 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RPH3AQ9Y2J0 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPH3AQ9Y2J0 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.62■□□□□ 0.73
RPH3AQ9Y2J0 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPH3AQ9Y2J0 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.61■□□□□ 0.73
RPH3AQ9Y2J0 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPH3AQ9Y2J0 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RPH3AQ9Y2J0 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPH3AQ9Y2J0 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPH3AQ9Y2J0 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPH3AQ9Y2J0 AC027612.3-201ENST00000413684 1047 ntBASIC19.61■□□□□ 0.73
RPH3AQ9Y2J0 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.61■□□□□ 0.73
RPH3AQ9Y2J0 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.61■□□□□ 0.73
RPH3AQ9Y2J0 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPH3AQ9Y2J0 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPH3AQ9Y2J0 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 238.7 ms