Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC26.33■■□□□ 1.81
ZC3H4Q9UPT8 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC26.33■■□□□ 1.81
ZC3H4Q9UPT8 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC26.33■■□□□ 1.81
ZC3H4Q9UPT8 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
ZC3H4Q9UPT8 UBE2SP1-201ENST00000450587 669 ntBASIC26.33■■□□□ 1.81
ZC3H4Q9UPT8 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC26.33■■□□□ 1.81
ZC3H4Q9UPT8 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC26.33■■□□□ 1.81
ZC3H4Q9UPT8 AC073912.3-201ENST00000624414 853 ntBASIC26.33■■□□□ 1.81
ZC3H4Q9UPT8 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
ZC3H4Q9UPT8 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
ZC3H4Q9UPT8 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ZC3H4Q9UPT8 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ZC3H4Q9UPT8 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC26.32■■□□□ 1.8
ZC3H4Q9UPT8 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC26.32■■□□□ 1.8
ZC3H4Q9UPT8 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC26.32■■□□□ 1.8
ZC3H4Q9UPT8 AC093787.1-201ENST00000450396 207 ntBASIC26.32■■□□□ 1.8
ZC3H4Q9UPT8 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC26.32■■□□□ 1.8
ZC3H4Q9UPT8 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ZC3H4Q9UPT8 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ZC3H4Q9UPT8 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
ZC3H4Q9UPT8 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC26.32■■□□□ 1.8
ZC3H4Q9UPT8 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC26.31■■□□□ 1.8
ZC3H4Q9UPT8 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC26.31■■□□□ 1.8
ZC3H4Q9UPT8 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC26.31■■□□□ 1.8
ZC3H4Q9UPT8 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
ZC3H4Q9UPT8 BMP1-204ENST00000397814 836 ntTSL 4 BASIC26.31■■□□□ 1.8
ZC3H4Q9UPT8 BX276092.2-201ENST00000417668 665 ntBASIC26.31■■□□□ 1.8
ZC3H4Q9UPT8 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC26.31■■□□□ 1.8
ZC3H4Q9UPT8 AC026366.1-201ENST00000488803 879 ntBASIC26.31■■□□□ 1.8
ZC3H4Q9UPT8 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC26.31■■□□□ 1.8
ZC3H4Q9UPT8 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC26.31■■□□□ 1.8
ZC3H4Q9UPT8 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ZC3H4Q9UPT8 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC26.31■■□□□ 1.8
ZC3H4Q9UPT8 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC26.3■■□□□ 1.8
ZC3H4Q9UPT8 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
ZC3H4Q9UPT8 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
ZC3H4Q9UPT8 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC26.3■■□□□ 1.8
ZC3H4Q9UPT8 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
ZC3H4Q9UPT8 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC26.3■■□□□ 1.8
ZC3H4Q9UPT8 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
ZC3H4Q9UPT8 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
ZC3H4Q9UPT8 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC26.3■■□□□ 1.8
ZC3H4Q9UPT8 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC26.3■■□□□ 1.8
ZC3H4Q9UPT8 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
ZC3H4Q9UPT8 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
ZC3H4Q9UPT8 AC055733.4-201ENST00000638462 1354 ntBASIC26.3■■□□□ 1.8
ZC3H4Q9UPT8 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC26.29■■□□□ 1.8
ZC3H4Q9UPT8 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC26.29■■□□□ 1.8
ZC3H4Q9UPT8 MIR718-201ENST00000390190 70 ntBASIC26.29■■□□□ 1.8
ZC3H4Q9UPT8 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC26.29■■□□□ 1.8
ZC3H4Q9UPT8 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC26.29■■□□□ 1.8
ZC3H4Q9UPT8 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
ZC3H4Q9UPT8 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC26.29■■□□□ 1.8
ZC3H4Q9UPT8 AC091874.3-201ENST00000512672 1195 ntBASIC26.29■■□□□ 1.8
ZC3H4Q9UPT8 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
ZC3H4Q9UPT8 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ZC3H4Q9UPT8 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
ZC3H4Q9UPT8 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
ZC3H4Q9UPT8 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC26.28■■□□□ 1.8
ZC3H4Q9UPT8 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
ZC3H4Q9UPT8 AC016405.3-201ENST00000607710 860 ntBASIC26.28■■□□□ 1.8
ZC3H4Q9UPT8 INO80E-214ENST00000620599 515 ntTSL 2 BASIC26.28■■□□□ 1.8
ZC3H4Q9UPT8 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC26.28■■□□□ 1.8
ZC3H4Q9UPT8 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC26.27■■□□□ 1.8
ZC3H4Q9UPT8 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
ZC3H4Q9UPT8 UNC93B5-201ENST00000530315 699 ntBASIC26.27■■□□□ 1.8
ZC3H4Q9UPT8 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC26.27■■□□□ 1.8
ZC3H4Q9UPT8 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC26.27■■□□□ 1.8
ZC3H4Q9UPT8 AC073648.6-201ENST00000641589 218 ntBASIC26.27■■□□□ 1.8
ZC3H4Q9UPT8 MME-217ENST00000616757 1315 ntTSL 5 BASIC26.27■■□□□ 1.8
ZC3H4Q9UPT8 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
ZC3H4Q9UPT8 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
ZC3H4Q9UPT8 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
ZC3H4Q9UPT8 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ZC3H4Q9UPT8 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ZC3H4Q9UPT8 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC26.26■■□□□ 1.79
ZC3H4Q9UPT8 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC26.26■■□□□ 1.79
ZC3H4Q9UPT8 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
ZC3H4Q9UPT8 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
ZC3H4Q9UPT8 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
ZC3H4Q9UPT8 RHOD-202ENST00000532559 538 ntTSL 3 BASIC26.26■■□□□ 1.79
ZC3H4Q9UPT8 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
ZC3H4Q9UPT8 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ZC3H4Q9UPT8 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ZC3H4Q9UPT8 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
ZC3H4Q9UPT8 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
ZC3H4Q9UPT8 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
ZC3H4Q9UPT8 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC26.25■■□□□ 1.79
ZC3H4Q9UPT8 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC26.25■■□□□ 1.79
ZC3H4Q9UPT8 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
ZC3H4Q9UPT8 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
ZC3H4Q9UPT8 PLLP-204ENST00000569059 665 ntTSL 3 BASIC26.25■■□□□ 1.79
ZC3H4Q9UPT8 AC010331.1-201ENST00000611423 582 ntBASIC26.25■■□□□ 1.79
ZC3H4Q9UPT8 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
ZC3H4Q9UPT8 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
ZC3H4Q9UPT8 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC26.25■■□□□ 1.79
ZC3H4Q9UPT8 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
ZC3H4Q9UPT8 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
ZC3H4Q9UPT8 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
ZC3H4Q9UPT8 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms