Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
MACF1Q9UPN3 PVRIG2P-201ENST00000435460 978 ntBASIC9.07□□□□□ -0.96
MACF1Q9UPN3 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
MACF1Q9UPN3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
MACF1Q9UPN3 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
MACF1Q9UPN3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
MACF1Q9UPN3 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
MACF1Q9UPN3 EEF1DP3-203ENST00000566025 782 ntBASIC9.07□□□□□ -0.96
MACF1Q9UPN3 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
MACF1Q9UPN3 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
MACF1Q9UPN3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC9.06□□□□□ -0.96
MACF1Q9UPN3 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
MACF1Q9UPN3 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
MACF1Q9UPN3 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
MACF1Q9UPN3 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC9.06□□□□□ -0.96
MACF1Q9UPN3 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC9.06□□□□□ -0.96
MACF1Q9UPN3 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
MACF1Q9UPN3 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
MACF1Q9UPN3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC9.06□□□□□ -0.96
MACF1Q9UPN3 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
MACF1Q9UPN3 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC9.06□□□□□ -0.96
MACF1Q9UPN3 AP001412.1-201ENST00000608405 714 ntBASIC9.06□□□□□ -0.96
MACF1Q9UPN3 AL049637.2-201ENST00000641778 930 ntBASIC9.06□□□□□ -0.96
MACF1Q9UPN3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
MACF1Q9UPN3 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC9.06□□□□□ -0.96
MACF1Q9UPN3 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
MACF1Q9UPN3 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
MACF1Q9UPN3 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC9.06□□□□□ -0.96
MACF1Q9UPN3 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
MACF1Q9UPN3 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC9.06□□□□□ -0.96
MACF1Q9UPN3 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC9.06□□□□□ -0.96
MACF1Q9UPN3 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
MACF1Q9UPN3 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC9.06□□□□□ -0.96
MACF1Q9UPN3 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
MACF1Q9UPN3 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
MACF1Q9UPN3 STX4-202ENST00000394998 1498 ntTSL 2 BASIC9.06□□□□□ -0.96
MACF1Q9UPN3 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC9.06□□□□□ -0.96
MACF1Q9UPN3 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC9.06□□□□□ -0.96
MACF1Q9UPN3 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC9.06□□□□□ -0.96
MACF1Q9UPN3 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC9.06□□□□□ -0.96
MACF1Q9UPN3 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC9.06□□□□□ -0.96
MACF1Q9UPN3 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
MACF1Q9UPN3 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
MACF1Q9UPN3 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC9.05□□□□□ -0.96
MACF1Q9UPN3 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
MACF1Q9UPN3 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
MACF1Q9UPN3 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC9.05□□□□□ -0.96
MACF1Q9UPN3 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
MACF1Q9UPN3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
MACF1Q9UPN3 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
MACF1Q9UPN3 IPPK-202ENST00000375522 882 ntTSL 3 BASIC9.05□□□□□ -0.96
MACF1Q9UPN3 BMP1-204ENST00000397814 836 ntTSL 4 BASIC9.05□□□□□ -0.96
MACF1Q9UPN3 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC9.05□□□□□ -0.96
MACF1Q9UPN3 Six3os1_6.1-201ENST00000620790 196 ntBASIC9.05□□□□□ -0.96
MACF1Q9UPN3 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
MACF1Q9UPN3 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC9.05□□□□□ -0.96
MACF1Q9UPN3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC9.05□□□□□ -0.96
MACF1Q9UPN3 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
MACF1Q9UPN3 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
MACF1Q9UPN3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC9.05□□□□□ -0.96
MACF1Q9UPN3 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
MACF1Q9UPN3 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
MACF1Q9UPN3 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC9.05□□□□□ -0.96
MACF1Q9UPN3 DUX4L26-201ENST00000489078 1255 ntBASIC9.05□□□□□ -0.96
MACF1Q9UPN3 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
MACF1Q9UPN3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
MACF1Q9UPN3 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC9.05□□□□□ -0.96
MACF1Q9UPN3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
MACF1Q9UPN3 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC9.05□□□□□ -0.96
MACF1Q9UPN3 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
MACF1Q9UPN3 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
MACF1Q9UPN3 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
MACF1Q9UPN3 AC007322.4-201ENST00000509611 723 ntBASIC9.05□□□□□ -0.96
MACF1Q9UPN3 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC9.05□□□□□ -0.96
MACF1Q9UPN3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC9.05□□□□□ -0.96
MACF1Q9UPN3 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC9.05□□□□□ -0.96
MACF1Q9UPN3 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC9.05□□□□□ -0.96
MACF1Q9UPN3 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
MACF1Q9UPN3 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
MACF1Q9UPN3 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
MACF1Q9UPN3 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
MACF1Q9UPN3 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
MACF1Q9UPN3 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
MACF1Q9UPN3 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC9.04□□□□□ -0.96
MACF1Q9UPN3 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
MACF1Q9UPN3 AL450487.1-201ENST00000426799 995 ntBASIC9.04□□□□□ -0.96
MACF1Q9UPN3 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC9.04□□□□□ -0.96
MACF1Q9UPN3 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC9.04□□□□□ -0.96
MACF1Q9UPN3 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
MACF1Q9UPN3 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC9.04□□□□□ -0.96
MACF1Q9UPN3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
MACF1Q9UPN3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
MACF1Q9UPN3 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
MACF1Q9UPN3 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
MACF1Q9UPN3 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
MACF1Q9UPN3 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
MACF1Q9UPN3 TERF1P1-201ENST00000311003 1181 ntBASIC9.04□□□□□ -0.96
MACF1Q9UPN3 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
MACF1Q9UPN3 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC9.04□□□□□ -0.96
MACF1Q9UPN3 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC9.04□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms