Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
LHX6Q9UPM6 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
LHX6Q9UPM6 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.37■□□□□ 0.85
LHX6Q9UPM6 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LHX6Q9UPM6 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.36■□□□□ 0.85
LHX6Q9UPM6 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LHX6Q9UPM6 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LHX6Q9UPM6 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LHX6Q9UPM6 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LHX6Q9UPM6 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.36■□□□□ 0.85
LHX6Q9UPM6 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
LHX6Q9UPM6 CNN2P6-201ENST00000439038 900 ntBASIC20.36■□□□□ 0.85
LHX6Q9UPM6 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.36■□□□□ 0.85
LHX6Q9UPM6 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.36■□□□□ 0.85
LHX6Q9UPM6 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.36■□□□□ 0.85
LHX6Q9UPM6 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.36■□□□□ 0.85
LHX6Q9UPM6 MIR4497-201ENST00000583208 89 ntBASIC20.36■□□□□ 0.85
LHX6Q9UPM6 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
LHX6Q9UPM6 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
LHX6Q9UPM6 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC20.36■□□□□ 0.85
LHX6Q9UPM6 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LHX6Q9UPM6 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
LHX6Q9UPM6 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
LHX6Q9UPM6 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LHX6Q9UPM6 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
LHX6Q9UPM6 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
LHX6Q9UPM6 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.35■□□□□ 0.85
LHX6Q9UPM6 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.35■□□□□ 0.85
LHX6Q9UPM6 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LHX6Q9UPM6 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.35■□□□□ 0.85
LHX6Q9UPM6 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.35■□□□□ 0.85
LHX6Q9UPM6 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
LHX6Q9UPM6 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
LHX6Q9UPM6 MKRN4P-201ENST00000444706 1521 ntBASIC20.35■□□□□ 0.85
LHX6Q9UPM6 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
LHX6Q9UPM6 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LHX6Q9UPM6 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
LHX6Q9UPM6 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LHX6Q9UPM6 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LHX6Q9UPM6 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LHX6Q9UPM6 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LHX6Q9UPM6 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LHX6Q9UPM6 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LHX6Q9UPM6 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LHX6Q9UPM6 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.34■□□□□ 0.85
LHX6Q9UPM6 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.34■□□□□ 0.85
LHX6Q9UPM6 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LHX6Q9UPM6 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.34■□□□□ 0.85
LHX6Q9UPM6 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.34■□□□□ 0.85
LHX6Q9UPM6 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
LHX6Q9UPM6 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
LHX6Q9UPM6 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LHX6Q9UPM6 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.34■□□□□ 0.85
LHX6Q9UPM6 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.34■□□□□ 0.85
LHX6Q9UPM6 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LHX6Q9UPM6 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LHX6Q9UPM6 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.33■□□□□ 0.85
LHX6Q9UPM6 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LHX6Q9UPM6 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.33■□□□□ 0.85
LHX6Q9UPM6 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.33■□□□□ 0.84
LHX6Q9UPM6 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LHX6Q9UPM6 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
LHX6Q9UPM6 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LHX6Q9UPM6 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
LHX6Q9UPM6 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
LHX6Q9UPM6 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LHX6Q9UPM6 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LHX6Q9UPM6 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.32■□□□□ 0.84
LHX6Q9UPM6 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
LHX6Q9UPM6 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.32■□□□□ 0.84
LHX6Q9UPM6 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LHX6Q9UPM6 UNC93B5-201ENST00000530315 699 ntBASIC20.32■□□□□ 0.84
LHX6Q9UPM6 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.32■□□□□ 0.84
LHX6Q9UPM6 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
LHX6Q9UPM6 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
LHX6Q9UPM6 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LHX6Q9UPM6 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
LHX6Q9UPM6 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.31■□□□□ 0.84
LHX6Q9UPM6 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LHX6Q9UPM6 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.31■□□□□ 0.84
LHX6Q9UPM6 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LHX6Q9UPM6 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LHX6Q9UPM6 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LHX6Q9UPM6 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LHX6Q9UPM6 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.31■□□□□ 0.84
LHX6Q9UPM6 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.31■□□□□ 0.84
LHX6Q9UPM6 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LHX6Q9UPM6 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LHX6Q9UPM6 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.3■□□□□ 0.84
LHX6Q9UPM6 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.3■□□□□ 0.84
LHX6Q9UPM6 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LHX6Q9UPM6 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LHX6Q9UPM6 AC142381.3-201ENST00000568208 1670 ntBASIC20.3■□□□□ 0.84
LHX6Q9UPM6 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
LHX6Q9UPM6 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LHX6Q9UPM6 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
LHX6Q9UPM6 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.3■□□□□ 0.84
LHX6Q9UPM6 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LHX6Q9UPM6 AC083880.1-201ENST00000608266 535 ntBASIC20.3■□□□□ 0.84
LHX6Q9UPM6 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms